RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 FIBINQ8TAL6 211 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 GPR148Q8TDV2 347 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 GPX8Q8TED1 209 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 TMEM255BQ8WV15 326 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 NUDCD2Q8WVJ2 157 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 TMEM239Q8WW34 195 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 BRI3BPQ8WY22 251 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 HOXB13Q92826 284 aaPredicted RBP5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 GLYATL1Q969I3 302 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 EXOSC8Q96B26 276 aaKnown RBP5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 ZNF514Q96K75 400 aaPredicted RBP5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 ZC3H10Q96K80 434 aaKnown RBP5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 SMIM8Q96KF7 97 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 OR14A2Q96R54 314 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 PRSS27Q9BQR3 290 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 MESP1Q9BRJ9 268 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 TRMT61BQ9BVS5 477 aaKnown RBP5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 ACTRT3Q9BYD9 372 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 SLC17A9Q9BYT1 436 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 TLNRD1Q9H1K6 362 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 KCNK12Q9HB15 430 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 TREM1Q9NP99 234 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 ACKR4Q9NPB9 350 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 PRSS16Q9NQE7 514 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 PRMT8Q9NR22 394 aaPredicted RBP5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 STEAP1Q9UHE8 339 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 LSM7Q9UK45 103 aaKnown RBP5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 HS3ST2Q9Y278 367 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 SIGLEC7Q9Y286 467 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 ZNF337Q9Y3M9 751 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 TIMM10BQ9Y5J6 103 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 WIF1Q9Y5W5 379 aa5.39□□□□□ -1.55
SNRPA1-209ENST00000560307 PLXND1Q9Y4D7 1925 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TBC1D3DA0A087WVF3 549 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TBC1D3IA0A087WXS9 549 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TBC1D3KA0A087X1G2 549 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TRBV5-7A0A0A0MS05 114 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 A0A0B4J2A0 478 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TBC1D3BA6NDS4 549 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TBC1D3FA6NER0 549 aaPredicted RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TVP23AA6NH52 213 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 IDSB3KWA1 339 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TBC1D3LB9A6J9 549 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 F5H0A9 414 aaPredicted RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 K7ERQ8 282 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 CDC42EP2O14613 210 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TAAR5O14804 337 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 SEPT4O43236 478 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 DOK2O60496 412 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 AKR7A3O95154 331 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TBX6O95947 436 aaPredicted RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 THY1P04216 161 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 AMY1AP04745 511 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 RPN2P04844 631 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 HMGN2P05204 90 aaKnown RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 CD5P06127 495 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 GUSBP08236 651 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TACSTD2P09758 323 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 IL9P15248 144 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 CSNK2A2P19784 350 aaPredicted RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 MAOAP21397 527 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 RPS4Y1P22090 263 aaKnown RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 ITPKBP27987 946 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TEAD1P28347 426 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 PRSS3P35030 304 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 GPX4P36969 197 aaPredicted RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 GLP1RP43220 463 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 HTR5AP47898 357 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 CX3CR1P49238 355 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 PRKXP51817 358 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 NCBP2P52298 156 aaKnown RBP eCLIP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 ZNF136P52737 540 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 CCL23P55773 120 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TAS2R31P59538 309 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TAS2R60P59551 318 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 RPS16P62249 146 aaKnown RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 EEF1A1P68104 462 aaKnown RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 RELQ04864 619 aaPredicted RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 FABP9Q0Z7S8 132 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 AIMP2Q13155 320 aaKnown RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 SRSF5Q13243 272 aaKnown RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 ZNF234Q14588 700 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 KCNAB1Q14722 419 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 MEF2DQ14814 521 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 LASP1Q14847 261 aaKnown RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 RPE65Q16518 533 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 ZNF239Q16600 458 aaKnown RBP5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 ARHGAP11BQ3KRB8 267 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 AMZ1Q400G9 498 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 Q499Y3 187 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TP53I3Q53FA7 332 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TBC1D3GQ6DHY5 549 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 OR4C11Q6IEV9 310 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TBC1D3CQ6IPX1 549 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 TMEM71Q6P5X7 295 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 STAC2Q6ZMT1 411 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 HIST2H3AQ71DI3 136 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 DPPA4Q7L190 304 aa5.38□□□□□ -1.55
SNRPA1-209ENST00000560307 LYG2Q86SG7 212 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms