RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 OR8B4Q96RC9 309 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 COMMD4Q9H0A8 199 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 CYSLTR2Q9NS75 346 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 EXTL2Q9UBQ6 330 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 PCNX3Q9H6A9 2034 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 USP24Q9UPU5 2620 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 ARPC4-TTLL3A0A0A6YYG9 625 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 GPANK1O95872 356 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 ELK1P19419 428 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 POU3F1Q03052 451 aaPredicted RBP15.89■□□□□ 0.13
SNX1-208ENST00000559844 RASGEF1BQ0VAM2 473 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 MFAP5Q13361 173 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 ST3GAL2Q16842 350 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 ZNF468Q5VIY5 522 aaPredicted RBP15.89■□□□□ 0.13
SNX1-208ENST00000559844 PRAMEF20Q5VT98 475 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 TRIQKQ629K1 86 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 ZNF544Q6NX49 715 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 KCTD18Q6PI47 426 aaPredicted RBP15.89■□□□□ 0.13
SNX1-208ENST00000559844 KDM8Q8N371 416 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 TRMT10AQ8TBZ6 339 aaKnown RBP15.89■□□□□ 0.13
SNX1-208ENST00000559844 PAQR8Q8TEZ7 354 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 MAP6Q96JE9 813 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 KCNK17Q96T54 332 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 TSPAN10Q9H1Z9 355 aaPredicted RBP15.89■□□□□ 0.13
SNX1-208ENST00000559844 NOX4Q9NPH5 578 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 PLA2G3Q9NZ20 509 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 KCNG2Q9UJ96 466 aa15.89■□□□□ 0.13
SNX1-208ENST00000559844 RPH3AQ9Y2J0 694 aaPredicted RBP15.89■□□□□ 0.13
SNX1-208ENST00000559844 ATMQ13315 3056 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 A0A1W2PPK0 400 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 TMEM212A6NML5 194 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 MKRN2OSH3BPM6 223 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 WDPCPO95876 746 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 HLA-DQB1P01920 261 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 SPARCP09486 303 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 SLC2A2P11168 524 aaPredicted RBP15.88■□□□□ 0.13
SNX1-208ENST00000559844 SRMP19623 302 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 NPR2P20594 1047 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 ADAM8P78325 824 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 OC90Q02509 493 aaPredicted RBP15.88■□□□□ 0.13
SNX1-208ENST00000559844 INPP5JQ15735 1006 aaPredicted RBP15.88■□□□□ 0.13
SNX1-208ENST00000559844 Q499Y3 187 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 FDX2Q6P4F2 183 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 Q8N402 240 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 THRSPQ92748 146 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 DERL3Q96Q80 235 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 SLC22A4Q9H015 551 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 MRPL22Q9NWU5 206 aaKnown RBP15.88■□□□□ 0.13
SNX1-208ENST00000559844 HPF1Q9NWY4 346 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 FRRS1LQ9P0K9 344 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 HDGFL3Q9Y3E1 203 aa15.88■□□□□ 0.13
SNX1-208ENST00000559844 PCDHGA9Q9Y5G4 932 aaKnown RBP15.88■□□□□ 0.13
SNX1-208ENST00000559844 KHDRBS3O75525 346 aaKnown RBP15.87■□□□□ 0.13
SNX1-208ENST00000559844 EPXP11678 715 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 CASRP41180 1078 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 CYB561P49447 251 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 ROM1Q03395 351 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 SLC25A35Q3KQZ1 300 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 CEP78Q5JTW2 689 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 SLC22A10Q63ZE4 541 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 HDDC2Q7Z4H3 204 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 ZNF679Q8IYX0 411 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 SAMD12Q8N8I0 201 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 C19orf18Q8NEA5 215 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 OR2G2Q8NGZ5 317 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 SMAD5Q99717 465 aaKnown RBP15.87■□□□□ 0.13
SNX1-208ENST00000559844 UTP23Q9BRU9 249 aaKnown RBP15.87■□□□□ 0.13
SNX1-208ENST00000559844 SLITRK2Q9H156 845 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 SLCO1C1Q9NYB5 712 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 MALT1Q9UDY8 824 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 COA3Q9Y2R0 106 aaPredicted RBP15.87■□□□□ 0.13
SNX1-208ENST00000559844 TRBV5-5A0A0J9YX44 114 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 ZNF823P16415 610 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 PTGS2P35354 604 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 OR2B6P58173 313 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 ARG2P78540 354 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 SLC17A1Q14916 467 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 UEVLDQ8IX04 471 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 HSD17B8Q92506 261 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 RGP1Q92546 391 aaPredicted RBP15.87■□□□□ 0.13
SNX1-208ENST00000559844 NTNG2Q96CW9 530 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 CMTM3Q96MX0 182 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 ELOVL3Q9HB03 270 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 SH2D2AQ9NP31 389 aa15.87■□□□□ 0.13
SNX1-208ENST00000559844 OR4C45A6NMZ5 311 aa15.86■□□□□ 0.13
SNX1-208ENST00000559844 SNPHO15079 494 aa15.86■□□□□ 0.13
SNX1-208ENST00000559844 CD96P40200 585 aa15.86■□□□□ 0.13
SNX1-208ENST00000559844 RPS27P42677 84 aaKnown RBP15.86■□□□□ 0.13
SNX1-208ENST00000559844 CCR9P51686 369 aa15.86■□□□□ 0.13
SNX1-208ENST00000559844 DSCR4P56555 118 aaPredicted RBP15.86■□□□□ 0.13
SNX1-208ENST00000559844 EIF2B1Q14232 305 aaKnown RBP15.86■□□□□ 0.13
SNX1-208ENST00000559844 P2RY14Q15391 338 aa15.86■□□□□ 0.13
SNX1-208ENST00000559844 TAB1Q15750 504 aa15.86■□□□□ 0.13
SNX1-208ENST00000559844 ETFDHQ16134 617 aa15.86■□□□□ 0.13
SNX1-208ENST00000559844 ZNF239Q16600 458 aaKnown RBP15.86■□□□□ 0.13
SNX1-208ENST00000559844 MEP1BQ16820 701 aa15.86■□□□□ 0.13
SNX1-208ENST00000559844 NRARPQ7Z6K4 114 aa15.86■□□□□ 0.13
SNX1-208ENST00000559844 KRT77Q7Z794 578 aa15.86■□□□□ 0.13
SNX1-208ENST00000559844 GTPBP8Q8N3Z3 284 aaPredicted RBP15.86■□□□□ 0.13
SNX1-208ENST00000559844 ZNF676Q8N7Q3 588 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms