RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 MRAPQ8TCY5 172 aa9.04□□□□□ -0.96
TRAF3-207ENST00000559734 MAL2Q969L2 176 aa9.04□□□□□ -0.96
TRAF3-207ENST00000559734 THOC1Q96FV9 657 aaKnown RBP9.04□□□□□ -0.96
TRAF3-207ENST00000559734 TPT1P8Q9HAU6 139 aa9.04□□□□□ -0.96
TRAF3-207ENST00000559734 TMEM27Q9HBJ8 222 aa9.04□□□□□ -0.96
TRAF3-207ENST00000559734 LRCH1Q9Y2L9 728 aa9.04□□□□□ -0.96
TRAF3-207ENST00000559734 TANC2Q9HCD6 1990 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 CD55P08174 381 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 MELTFP08582 738 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 CSF1P09603 554 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 ALDOCP09972 364 aaKnown RBP9.03□□□□□ -0.96
TRAF3-207ENST00000559734 PGA4P0DJD7 388 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 PGA3P0DJD8 388 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 PPIAL4GP0DN37 164 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 THRBP10828 461 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 TNFRSF1AP19438 455 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 SLC18A1P54219 525 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 PCBP3P57721 371 aaKnown RBP9.03□□□□□ -0.96
TRAF3-207ENST00000559734 RGS8P57771 180 aaPredicted RBP9.03□□□□□ -0.96
TRAF3-207ENST00000559734 PPP1CBP62140 327 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 TAF11Q15544 211 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 OR1Q1Q15612 314 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 BEAN1Q3B7T3 259 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 TTMPQ5BVD1 217 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 FAM205BPQ63HN1 556 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 FAM91A1Q658Y4 838 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 UNQ6126/PRO20091Q6UXV3 157 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 Q6YL49 198 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 ZNF620Q6ZNG0 422 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 C1orf174Q8IYL3 243 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 MUC20Q8N307 709 aaPredicted RBP9.03□□□□□ -0.96
TRAF3-207ENST00000559734 ZNF283Q8N7M2 679 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 LSMEM1Q8N8F7 131 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 LINC01006Q8NI28 216 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 BBS10Q8TAM1 723 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 ITLN1Q8WWA0 313 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 RAB40AQ8WXH6 277 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 SLC35B4Q969S0 331 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 MCHR2Q969V1 340 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 VPS33AQ96AX1 596 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 SLC25A44Q96H78 314 aaPredicted RBP9.03□□□□□ -0.96
TRAF3-207ENST00000559734 ZNF347Q96SE7 839 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 AIG1Q9NVV5 245 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 THAP1Q9NVV9 213 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 CGGBP1Q9UFW8 167 aaPredicted RBP9.03□□□□□ -0.96
TRAF3-207ENST00000559734 SLC13A4Q9UKG4 626 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 PPP1R3CQ9UQK1 317 aa9.03□□□□□ -0.96
TRAF3-207ENST00000559734 A0A0B4J2E0 115 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 A0A1B0GX12 115 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 TRPC5OSA6NMA1 111 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 HDAC3O15379 428 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 PIP5K1CO60331 668 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 SNNO75324 88 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-207ENST00000559734 CH25HO95992 272 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 MT-ATP6P00846 226 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 IGHG1P01857 330 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 ADH4P08319 380 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 MMP7P09237 267 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-207ENST00000559734 UMPSP11172 480 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 ZNF32P17041 273 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 PRKAR1BP31321 381 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 CDAP32320 146 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 MAGOHP61326 146 aaKnown RBP9.02□□□□□ -0.97
TRAF3-207ENST00000559734 FGF12P61328 243 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 RUNDC3AQ59EK9 446 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 C6orf10Q5SRN2 563 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 BEND6Q5SZJ8 279 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-207ENST00000559734 KLBQ86Z14 1044 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 NOXO1Q8NFA2 376 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 TLCD1Q96CP7 247 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 POM121L2Q96KW2 1035 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 SIGLEC11Q96RL6 698 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 NUDT16L1Q9BRJ7 211 aaKnown RBP9.02□□□□□ -0.97
TRAF3-207ENST00000559734 PCGF1Q9BSM1 259 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 KRTAP3-3Q9BYR6 98 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 WDR55Q9H6Y2 383 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-207ENST00000559734 TMBIM4Q9HC24 238 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 NOX4Q9NPH5 578 aa9.02□□□□□ -0.97
TRAF3-207ENST00000559734 THUMPD1Q9NXG2 353 aaKnown RBP9.02□□□□□ -0.97
TRAF3-207ENST00000559734 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-207ENST00000559734 LOC100509620A0A075B734 347 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 MCIDASD6RGH6 385 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 H0YL77 283 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 KPNA4O00629 521 aaPredicted RBP9.01□□□□□ -0.97
TRAF3-207ENST00000559734 GPR137BO60478 399 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 TPST1O60507 370 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 CLPXO76031 633 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 WNT2P09544 360 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 KITP10721 976 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 EPHA3P29320 983 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 ARHGDIAP52565 204 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 CDH12P55289 794 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 PROK1P58294 105 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 ERVK-25P63136 954 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 PAX2Q02962 417 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 SGCAQ16586 387 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 TMEM86BQ8N661 226 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 NFKBIDQ8NI38 313 aa9.01□□□□□ -0.97
TRAF3-207ENST00000559734 TBC1D15Q8TC07 691 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms