RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 ZNF17P17021 662 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 ELK1P19419 428 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 CXCR1P25024 350 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 UQCRC1P31930 480 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 AQP2P41181 271 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 NAA10P41227 235 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 TDGF1P3P51864 188 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 SLC25A1P53007 311 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 SUCLG1P53597 346 aaKnown RBP14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 SIRPAP78324 504 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 LTBQ06643 244 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 IL18Q14116 193 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 CCDC58Q4VC31 144 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 LINC01590Q5TEZ4 76 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 SFXN4Q6P4A7 337 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 PAMR1Q6UXH9 720 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 LRRC28Q86X40 367 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 KTI12Q96EK9 354 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 MARCH7Q9H992 704 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 B3GAT2Q9NPZ5 323 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 CYSLTR2Q9NS75 346 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 CFAP46Q8IYW2 2715 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 TRAV1-2A0A0B4J238 106 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 A0A1B0GVC2 190 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 LINC00854A0A1B0GVQ3 168 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 BLOC1S5-TXNDC5H3BN57 136 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 CRYABP02511 175 aaKnown RBP14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 SFTPDP35247 375 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 CDKN2AP42771 156 aaKnown RBP14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 LHX2P50458 406 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 TMEM176BQ3YBM2 270 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 RPL22L1Q6P5R6 122 aaKnown RBP14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 FAM180AQ6UWF9 173 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 GGNQ86UU5 652 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 MRPL48Q96GC5 212 aaKnown RBP14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 ZC3HAV1LQ96H79 300 aaKnown RBP14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 Q96M85 177 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 KCNJ15Q99712 375 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 LDAHQ9H6V9 325 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 MALT1Q9UDY8 824 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 COPS3Q9UNS2 423 aa14.13□□□□□ -0.15
CDC42BPB-204ENST00000559043 TEX13CA0A0J9YWL9 993 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 A0A1B0GTH9 108 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 TTLL8A6PVC2 850 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 SELENOFO60613 162 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 SDHAP31040 664 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 GDI2P50395 445 aaKnown RBP14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 OR10A3P58181 314 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 RAC1P63000 192 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 C3AR1Q16581 482 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 ALG10Q5BKT4 473 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 TRIQKQ629K1 86 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 LEG1Q6P5S2 330 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 RPS4Y2Q8TD47 263 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 SNX33Q8WV41 574 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 TAAR8Q969N4 342 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 PTDSS2Q9BVG9 487 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 COL6A6A6NMZ7 2263 aa14.12□□□□□ -0.15
CDC42BPB-204ENST00000559043 A0A0J9YW62 118 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 A0A1W2PNR3 127 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 MEIOCA2RUB1 952 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 MAGEB4O15481 346 aaPredicted RBP14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 KIR2DL3P43628 341 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 CLDN18P56856 261 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 RPS11P62280 158 aaKnown RBP eCLIP14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 MADCAM1Q13477 382 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 KCNJ8Q15842 424 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 EMC4Q5J8M3 183 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 C10orf53Q8N6V4 93 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 C19orf18Q8NEA5 215 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 OR13C5Q8NGS8 318 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 OR6F1Q8NGZ6 308 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 GPR137Q96N19 417 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 SLX1AQ9BQ83 275 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 TTTY10Q9BZA0 68 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 MMP28Q9H239 520 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 ZCCHC4Q9H5U6 513 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 EXTL2Q9UBQ6 330 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 MOKQ9UQ07 419 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 RASD1Q9Y272 281 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 GTF3C1Q12789 2109 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 A0A1W2PRG6 482 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 A8MVM7 634 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 FAM25AB3EWG3 89 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 FAM25CB3EWG5 89 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 FAM25GB3EWG6 89 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 ZNF208O43345 1280 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 GATBO75879 557 aaKnown RBP14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 CCNKO75909 580 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 TRAPPC2P0DI81 140 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 TRAPPC2BP0DI82 140 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 NPR2P20594 1047 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 CTXN1P60606 82 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 ZNF684Q5T5D7 378 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 C3orf33Q6P1S2 294 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 GHDCQ8N2G8 530 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 OR6K6Q8NGW6 343 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 ALG12Q9BV10 488 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 EXO5Q9H790 373 aa14.11□□□□□ -0.15
CDC42BPB-204ENST00000559043 FKRPQ9H9S5 495 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms