RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 MUCL1Q96DR8 90 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 ZMYND19Q96E35 227 aaPredicted RBP10.87□□□□□ -0.67
GABPB1-208ENST00000558970 MUS81Q96NY9 551 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 SNX18Q96RF0 628 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 DDOQ99489 341 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 RNF121Q9H920 327 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 NOX3Q9HBY0 568 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 DNAJC27Q9NZQ0 273 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 ABCA12Q86UK0 2595 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 TEP1Q99973 2627 aaKnown RBP10.87□□□□□ -0.67
GABPB1-208ENST00000558970 AHCYL1O43865 530 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 MRPL3P09001 348 aaKnown RBP10.86□□□□□ -0.67
GABPB1-208ENST00000558970 COX6B1P14854 86 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 MSR1P21757 451 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 ZNF133P52736 654 aaPredicted RBP10.86□□□□□ -0.67
GABPB1-208ENST00000558970 MRPS34P82930 218 aaKnown RBP10.86□□□□□ -0.67
GABPB1-208ENST00000558970 TIMM23BQ5SRD1 257 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 C6orf52Q5T4I8 152 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 ZBTB46Q86UZ6 589 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 MDP1Q86V88 176 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 LINC00346Q8IVM7 164 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 DHRSXQ8N5I4 330 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 ZNF511Q8NB15 262 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 OR10H5Q8NGA6 315 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 TMEM163Q8TC26 289 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 C11orf40Q8WZ69 217 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 PTP4A1Q93096 173 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 HRASLS5Q96KN8 279 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 ADI1Q9BV57 179 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 ZNF416Q9BWM5 594 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 RACGAP1Q9H0H5 632 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 VCX3BQ9H321 246 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 CCNB1IP1Q9NPC3 277 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 POLE4Q9NR33 117 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 ZNF224Q9NZL3 707 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 NPAP1Q9NZP6 1156 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 AMDHD2Q9Y303 409 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 SLC25A15Q9Y619 301 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 FKBP7Q9Y680 259 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 PRR14LQ5THK1 2151 aa10.86□□□□□ -0.67
GABPB1-208ENST00000558970 CASKO14936 926 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 APOL3O95236 402 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 WNT11O96014 354 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 TFP02787 698 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 CELA3BP08861 270 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 GAAP10253 952 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 ZNF32P17041 273 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 NAA10P41227 235 aaPredicted RBP10.85□□□□□ -0.67
GABPB1-208ENST00000558970 IDH3GP51553 393 aaPredicted RBP10.85□□□□□ -0.67
GABPB1-208ENST00000558970 ADAM8P78325 824 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 IL5RAQ01344 420 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 TEKQ02763 1124 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 GLO1Q04760 184 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 GSG1Q2KHT4 349 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 TMEM154Q6P9G4 183 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 CORO6Q6QEF8 472 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 MYPOPQ86VE0 399 aaPredicted RBP10.85□□□□□ -0.67
GABPB1-208ENST00000558970 ERI1Q8IV48 349 aaKnown RBP10.85□□□□□ -0.67
GABPB1-208ENST00000558970 C17orf78Q8N4C9 275 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 SMAP2Q8WU79 429 aaPredicted RBP10.85□□□□□ -0.67
GABPB1-208ENST00000558970 NANOS1Q8WY41 292 aaKnown RBP10.85□□□□□ -0.67
GABPB1-208ENST00000558970 HSD17B8Q92506 261 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 FBXO17Q96EF6 278 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 PIK3IP1Q96FE7 263 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 NMNAT2Q9BZQ4 307 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 KCNN2Q9H2S1 579 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 WDR76Q9H967 626 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 SIAEQ9HAT2 523 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 C8orf4Q9NR00 106 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 MRPL22Q9NWU5 206 aaKnown RBP10.85□□□□□ -0.67
GABPB1-208ENST00000558970 ZNF226Q9NYT6 803 aa10.85□□□□□ -0.67
GABPB1-208ENST00000558970 H2AFY2Q9P0M6 372 aaPredicted RBP10.85□□□□□ -0.67
GABPB1-208ENST00000558970 NDRG4Q9ULP0 352 aaKnown RBP10.85□□□□□ -0.67
GABPB1-208ENST00000558970 SELENOFO60613 162 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 RAB36O95755 333 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 GNAO1P09471 354 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 SPARCP09486 303 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 PSKH1P11801 424 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 PPP3CBP16298 524 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 ZNF823P16415 610 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 IGFBP2P18065 325 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 NPR2P20594 1047 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 SLC2A5P22732 501 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 FMO3P31513 532 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 SLC25A1P53007 311 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 RAB1AP62820 205 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 HSF2Q03933 536 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 SPOCK1Q08629 439 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 ENDOGQ14249 297 aaKnown RBP10.84□□□□□ -0.67
GABPB1-208ENST00000558970 RAB39AQ14964 217 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 SNCBQ16143 134 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 SLC36A2Q495M3 483 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 ZNF787Q6DD87 383 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 FOXL2NBQ6ZUU3 175 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 ENTHD1Q8IYW4 607 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 SLC26A10Q8NG04 563 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 OR6N2Q8NGY6 317 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 AKR7LQ8NHP1 331 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 PLPPR2Q96GM1 343 aa10.84□□□□□ -0.67
GABPB1-208ENST00000558970 MS4A3Q96HJ5 214 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms