RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 IGHV1-18A0A0C4DH31 117 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 CPSF4LA6NMK7 179 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 ZNF587BE7ETH6 402 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 SLC1A7O00341 560 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 FRS3O43559 492 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 LYPD3O95274 346 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 THY1P04216 161 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 ACAA2P42765 397 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 IDH2P48735 452 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 DVL1P1P54792 670 aaPredicted RBP13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 ACTG1P63261 375 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 IL5RAQ01344 420 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 IL1RL1Q01638 556 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 TSPAN31Q12999 210 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 HIKESHIQ53FT3 197 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 SLX4IPQ5VYV7 408 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 ZNF773Q6PK81 442 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 MBOAT2Q6ZWT7 520 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 ZER1Q7Z7L7 766 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 TEX29Q8N6K0 151 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 CLDN22Q8N7P3 220 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 C3orf56Q8N813 242 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 RHOXF1Q8NHV9 184 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 MPP4Q96JB8 637 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 TMED7Q9Y3B3 224 aa13.89□□□□□ -0.19
CDC42BPB-203ENST00000558867 A0A0B4J2E0 115 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 A0A1B0GX12 115 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 HTR3EA5X5Y0 456 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 CHP2O43745 196 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 HOXB1P14653 301 aaPredicted RBP13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 IFNGR1P15260 489 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 GABRB1P18505 474 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 FPR3P25089 353 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 HTR2AP28223 471 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 RBM34P42696 430 aaKnown RBP13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 OMPP47874 163 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 CDH15P55291 814 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 CDC42P60953 191 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 PTGES3Q15185 160 aaKnown RBP13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 OR1Q1Q15612 314 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 ADIPOQQ15848 244 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 TBRG1Q3YBR2 411 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 TMEM225Q6GV28 225 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 ANKRD16Q6P6B7 361 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 RASSF6Q6ZTQ3 369 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 GLCCI1Q86VQ1 547 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 ENTHD1Q8IYW4 607 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 ZNF418Q8TF45 676 aaPredicted RBP13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 TRUB1Q8WWH5 349 aaKnown RBP13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 CNOT9Q92600 299 aaKnown RBP13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 SNX18Q96RF0 628 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 PRSS27Q9BQR3 290 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 ZNF426Q9BUY5 554 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 DUSP21Q9H596 190 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 TMEM27Q9HBJ8 222 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 DYNLRB1Q9NP97 96 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 CCNB1IP1Q9NPC3 277 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 TPRKBQ9Y3C4 175 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 PCDHGB1Q9Y5G3 927 aa13.88□□□□□ -0.19
CDC42BPB-203ENST00000558867 B4DSR2 109 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 VAMP5O95183 116 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 PRG2P13727 222 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 JUNBP17275 347 aaPredicted RBP13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 NPR2P20594 1047 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 NAAAQ02083 359 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 C12orf73Q69YU5 71 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 LINC00114Q6XXX2 140 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 ZNF730Q6ZMV8 503 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 RRM2BQ7LG56 351 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 GPAT4Q86UL3 456 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 FAM169BQ8N8A8 192 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 NUP37Q8NFH4 326 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 OR9K2Q8NGE7 335 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 OR1K1Q8NGR3 316 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 UBASH3BQ8TF42 649 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 SOX7Q9BT81 388 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 TAPBPLQ9BX59 468 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 ZNF442Q9H7R0 627 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 SLC25A19Q9HC21 320 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 TMEM5Q9Y2B1 443 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 GRIP1Q9Y3R0 1128 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 TENM1Q9UKZ4 2725 aa13.87□□□□□ -0.19
CDC42BPB-203ENST00000558867 ARPC4-TTLL3A0A0A6YYG9 625 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 LILRA1O75019 489 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 WBP4O75554 376 aaKnown RBP13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 IGF2P01344 180 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 CXCR1P25024 350 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 TACR3P29371 465 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 SH3BGRP55822 239 aaPredicted RBP13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 SNRPGP62308 76 aaKnown RBP13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 SLC25A30Q5SVS4 291 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 NKAIN4Q8IVV8 208 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 IL17RDQ8NFM7 739 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 FAM81AQ8TBF8 368 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 APH1BQ8WW43 257 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 IPCEF1Q8WWN9 437 aaPredicted RBP13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 GCDHQ92947 438 aaPredicted RBP13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 SIGLEC11Q96RL6 698 aa13.86□□□□□ -0.19
CDC42BPB-203ENST00000558867 METTL17Q9H7H0 456 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms