RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 KCNE1BA0A087WTH5 132 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 IGHV3-64DA0A0J9YX35 117 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 A0A1W2PNU3 283 aaPredicted RBP2.97□□□□□ -1.93
CASC4-206ENST00000558847 NCF1BA6NI72 391 aaPredicted RBP2.97□□□□□ -1.93
CASC4-206ENST00000558847 FAM166BA8MTA8 275 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 NCF1CA8MVU1 366 aaPredicted RBP2.97□□□□□ -1.93
CASC4-206ENST00000558847 GOLGA8TH3BQL2 631 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 SCAMP2O15127 329 aaKnown RBP2.97□□□□□ -1.93
CASC4-206ENST00000558847 EIF4E2O60573 245 aaKnown RBP2.97□□□□□ -1.93
CASC4-206ENST00000558847 FKBP6O75344 327 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 SUPT3HO75486 399 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 CA11O75493 328 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 SLC25A27O95847 323 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 ACSM4P0C7M7 580 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 DUX4L4P0CJ87 422 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 ZNF250P15622 560 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 ZNF30P17039 623 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 RAB3BP20337 219 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 CNR1P21554 472 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 BCKDHBP21953 392 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 DCKP27707 260 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 CCT6AP40227 531 aaKnown RBP2.97□□□□□ -1.93
CASC4-206ENST00000558847 TNFSF9P41273 254 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 UBE2AP49459 152 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 EIF3EP60228 445 aaKnown RBP2.97□□□□□ -1.93
CASC4-206ENST00000558847 HERVK_113P61574 105 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 IFT88Q13099 833 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 TRAM2Q15035 370 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 WDR43Q15061 677 aaKnown RBP eCLIP2.97□□□□□ -1.93
CASC4-206ENST00000558847 NCF4Q15080 339 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 PSG5Q15238 335 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 QPRTQ15274 297 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 OR7A5Q15622 319 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 PSMD5Q16401 504 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 UBE2UQ5VVX9 321 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 CYB5R2Q6BCY4 276 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 CLEC2AQ6UVW9 174 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 ZNF493Q6ZR52 646 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 CMTM1Q8IZ96 169 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 PQLC3Q8N755 202 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 Q8N7P7 452 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 OR10G4Q8NGN3 311 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 LYPD6BQ8NI32 183 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 CAPSLQ8WWF8 208 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 CREB3L1Q96BA8 519 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 DNAJC19Q96DA6 116 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 OR5B12Q96R08 314 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 ZYG11BQ9C0D3 744 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 DDX18Q9NVP1 670 aaKnown RBP2.97□□□□□ -1.93
CASC4-206ENST00000558847 TBC1D24Q9ULP9 559 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 TP53TG5Q9Y2B4 290 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 SLC17A4Q9Y2C5 497 aa2.97□□□□□ -1.93
CASC4-206ENST00000558847 TRBV6-6A0A0A6YYG2 114 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 TRAV25A0A0B4J276 109 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 HIDE1A8MVS5 230 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 SUPT3HB4E1H0 165 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 H0YC42 278 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 KMOO15229 486 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 EIF3HO15372 352 aaKnown RBP eCLIP2.96□□□□□ -1.94
CASC4-206ENST00000558847 DPM1O60762 260 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 SRP72O76094 671 aaKnown RBP2.96□□□□□ -1.94
CASC4-206ENST00000558847 UTS2O95399 124 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 FOLR1P15328 257 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 GSTM3P21266 225 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 CDKN1BP46527 198 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 CSNK1EP49674 416 aaKnown RBP2.96□□□□□ -1.94
CASC4-206ENST00000558847 ZNF133P52736 654 aaPredicted RBP2.96□□□□□ -1.94
CASC4-206ENST00000558847 IRX3P78415 501 aaPredicted RBP2.96□□□□□ -1.94
CASC4-206ENST00000558847 SLC7A9P82251 487 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 SLC25A11Q02978 314 aaKnown RBP2.96□□□□□ -1.94
CASC4-206ENST00000558847 SPAG1Q07617 926 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 PRELID2Q8N945 189 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 OR9G4Q8NGQ1 327 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 OR5B3Q8NH48 314 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 OR5K2Q8NHB8 316 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 GLYATL2Q8WU03 294 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 IL22RA2Q969J5 263 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 ACTR3CQ9C0K3 210 aaPredicted RBP2.96□□□□□ -1.94
CASC4-206ENST00000558847 SLCO1B3Q9NPD5 702 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 ISYNA1Q9NPH2 558 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 KCNJ16Q9NPI9 418 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 PLEKHG2Q9H7P9 1386 aa2.96□□□□□ -1.94
CASC4-206ENST00000558847 TTC41PQ6P2S7 1318 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 GOLGA6L7A0A1B0GV03 622 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 M0R3G1 203 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 ICOSLGO75144 302 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 CLDN11O75508 207 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 CCNB2O95067 398 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 PCCAP05165 728 aaPredicted RBP2.95□□□□□ -1.94
CASC4-206ENST00000558847 SERPINE2P07093 398 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 GPX4P36969 197 aaPredicted RBP2.95□□□□□ -1.94
CASC4-206ENST00000558847 CXCL5P42830 114 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 VSX2P58304 361 aaPredicted RBP2.95□□□□□ -1.94
CASC4-206ENST00000558847 KRTAP12-2P59991 146 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 SP4Q02446 784 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 GINS1Q14691 196 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 KCTD19Q17RG1 926 aaPredicted RBP2.95□□□□□ -1.94
CASC4-206ENST00000558847 ZNF658BQ4V348 819 aaPredicted RBP2.95□□□□□ -1.94
CASC4-206ENST00000558847 SOHLH1Q5JUK2 328 aa2.95□□□□□ -1.94
CASC4-206ENST00000558847 PLCXD3Q63HM9 321 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms