RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 PIP5K1CO60331 668 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 SEC14L2O76054 403 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 CD14P08571 375 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 CALB2P22676 271 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 GLRXP35754 106 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 IFNGR2P38484 337 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 GIPRP48546 466 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 PTDSS1P48651 473 aaKnown RBP13.13□□□□□ -0.31
RPL28-206ENST00000558752 MRPS34P82930 218 aaKnown RBP13.13□□□□□ -0.31
RPL28-206ENST00000558752 PLP2Q04941 152 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 SNTB2Q13425 540 aaKnown RBP13.13□□□□□ -0.31
RPL28-206ENST00000558752 MTX3Q5HYI7 312 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 TBPL2Q6SJ96 375 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 SLC16A14Q7RTX9 510 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 OR4K5Q8NGD3 323 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 NMD3Q96D46 503 aaKnown RBP13.13□□□□□ -0.31
RPL28-206ENST00000558752 C1orf159Q96HA4 380 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 SOX7Q9BT81 388 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 RNF121Q9H920 327 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 FAM53CQ9NYF3 392 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 ZNF224Q9NZL3 707 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 ACTR3BQ9P1U1 418 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 GRHPRQ9UBQ7 328 aa13.13□□□□□ -0.31
RPL28-206ENST00000558752 M0R233 179 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 SYNGR3O43761 229 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 PTP4A3O75365 173 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 KRT36O76013 467 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 CELA3BP08861 270 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 ADRA2AP08913 450 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 RPL4P36578 427 aaKnown RBP13.12□□□□□ -0.31
RPL28-206ENST00000558752 RPS23P62266 143 aaKnown RBP13.12□□□□□ -0.31
RPL28-206ENST00000558752 GALK2Q01415 458 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 CD47Q08722 323 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 FHL1Q13642 323 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 RIN1Q13671 783 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 FAM27BQ5VT28 67 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 GPR139Q6DWJ6 353 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 SHQ1Q6PI26 577 aaKnown RBP13.12□□□□□ -0.31
RPL28-206ENST00000558752 SLC25A47Q6Q0C1 308 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 RINLQ6ZS11 566 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 ZNF418Q8TF45 676 aaPredicted RBP13.12□□□□□ -0.31
RPL28-206ENST00000558752 HDAC2Q92769 488 aaKnown RBP13.12□□□□□ -0.31
RPL28-206ENST00000558752 SH3GL3Q99963 347 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 C1orf21Q9H246 121 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 NOX3Q9HBY0 568 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 AURKCQ9UQB9 309 aa13.12□□□□□ -0.31
RPL28-206ENST00000558752 TRAV27A0A087WT01 109 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 IQCMA0A1B0GVH7 501 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 XKRYO14609 159 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 CDC42EP2O14613 210 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 ARPC2O15144 300 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 NDUFB2O95178 105 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 SEMG1P04279 462 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 FABP3P05413 133 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 FUT4P22083 530 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 GPR6P46095 362 aaPredicted RBP13.11□□□□□ -0.31
RPL28-206ENST00000558752 OMPP47874 163 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 PCBD1P61457 104 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 FGD3Q5JSP0 725 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 UNQ6126/PRO20091Q6UXV3 157 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 SYT9Q86SS6 491 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 C1orf174Q8IYL3 243 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 RBM15BQ8NDT2 890 aaKnown RBP13.11□□□□□ -0.31
RPL28-206ENST00000558752 OR13C2Q8NGS9 318 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 ZNF519Q8TB69 540 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 SEC61A2Q9H9S3 476 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 REV1Q9UBZ9 1251 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 SLC7A8Q9UHI5 535 aa13.11□□□□□ -0.31
RPL28-206ENST00000558752 TMEM129A0AVI4 362 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 GADD45GO95257 159 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 TFP02787 698 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 ANPEPP15144 967 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 ACHEP22303 614 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 CFPP27918 469 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 IL2RGP31785 369 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 MSX2P35548 267 aaPredicted RBP13.1□□□□□ -0.31
RPL28-206ENST00000558752 RAD52P43351 418 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 GPR4P46093 362 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 LIMS1P48059 325 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 HMGA2P52926 109 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 TMEM33P57088 247 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 SELENOVP59797 346 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 MYBPC1Q00872 1141 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 TOP3AQ13472 1001 aaPredicted RBP13.1□□□□□ -0.31
RPL28-206ENST00000558752 RAB39AQ14964 217 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 KRT80Q6KB66 452 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 DPY19L2P2Q6ZN68 376 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 MYPOPQ86VE0 399 aaPredicted RBP13.1□□□□□ -0.31
RPL28-206ENST00000558752 ALDH16A1Q8IZ83 802 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 ZCCHC24Q8N2G6 241 aaKnown RBP13.1□□□□□ -0.31
RPL28-206ENST00000558752 LINC00471Q8N535 108 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.1□□□□□ -0.31
RPL28-206ENST00000558752 MRPL24Q96A35 216 aaKnown RBP13.1□□□□□ -0.31
RPL28-206ENST00000558752 MS4A3Q96HJ5 214 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 JMJD8Q96S16 334 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 GPX7Q96SL4 187 aaPredicted RBP13.1□□□□□ -0.31
RPL28-206ENST00000558752 FUZQ9BT04 418 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 METTL17Q9H7H0 456 aaPredicted RBP13.1□□□□□ -0.31
RPL28-206ENST00000558752 CCNB1IP1Q9NPC3 277 aa13.1□□□□□ -0.31
RPL28-206ENST00000558752 TMCC3Q9ULS5 477 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms