RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 FEVQ99581 238 aa11.96□□□□□ -0.49
TSPAN3-205ENST00000558745 ZNF416Q9BWM5 594 aa11.96□□□□□ -0.49
TSPAN3-205ENST00000558745 NDEL1Q9GZM8 345 aa11.96□□□□□ -0.49
TSPAN3-205ENST00000558745 OR51B6Q9H340 312 aa11.96□□□□□ -0.49
TSPAN3-205ENST00000558745 FN3KQ9H479 309 aa11.96□□□□□ -0.49
TSPAN3-205ENST00000558745 CXorf56Q9H5V9 222 aa11.96□□□□□ -0.49
TSPAN3-205ENST00000558745 NTN4Q9HB63 628 aa11.96□□□□□ -0.49
TSPAN3-205ENST00000558745 CA10Q9NS85 328 aa11.96□□□□□ -0.49
TSPAN3-205ENST00000558745 CBLN4Q9NTU7 201 aa11.96□□□□□ -0.49
TSPAN3-205ENST00000558745 ZNF701Q9NV72 531 aaPredicted RBP11.96□□□□□ -0.49
TSPAN3-205ENST00000558745 VSX1Q9NZR4 365 aaPredicted RBP11.96□□□□□ -0.49
TSPAN3-205ENST00000558745 PDP1Q9P0J1 537 aaPredicted RBP11.96□□□□□ -0.49
TSPAN3-205ENST00000558745 CDH10Q9Y6N8 788 aa11.96□□□□□ -0.49
TSPAN3-205ENST00000558745 GPRIN2O60269 458 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 SERPINA5P05154 406 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 NPR2P20594 1047 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 PAX7P23759 505 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 APEX1P27695 318 aaKnown RBP11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 CENPAP49450 140 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 ATP5J2P56134 94 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 PSG4Q00888 419 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 ENDOGQ14249 297 aaKnown RBP11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 ADIPOQQ15848 244 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 SLC36A2Q495M3 483 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 PABPC1L2AQ5JQF8 200 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 Q5PR19 223 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 C1orf146Q5VVC0 180 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 AGAP6Q5VW22 663 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 TMEM53Q6P2H8 277 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 RASSF6Q6ZTQ3 369 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 CCDC121Q6ZUS5 278 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 FOXL2NBQ6ZUU3 175 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 YTHDF3Q7Z739 585 aaKnown RBP11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 TGIF2LYQ8IUE0 185 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 OR6V1Q8N148 313 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 LINC00471Q8N535 108 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 SDR9C7Q8NEX9 313 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 OR52E2Q8NGJ4 325 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 OR4Q3Q8NH05 313 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 POP5Q969H6 163 aaKnown RBP11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 TSSK6Q9BXA6 273 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 CACNG6Q9BXT2 260 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 DGCR6LQ9BY27 220 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 GSX2Q9BZM3 304 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 WNT5BQ9H1J7 359 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 CCNB1IP1Q9NPC3 277 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 POLE4Q9NR33 117 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 ARMC1Q9NVT9 282 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 IL20Q9NYY1 176 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 B9D1Q9UPM9 204 aa11.95□□□□□ -0.5
TSPAN3-205ENST00000558745 OR6C68A6NDL8 312 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 BHLHE40O14503 412 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 ARPC3O15145 178 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 KHDRBS3O75525 346 aaKnown RBP11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 IGHV4-39P01824 125 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 OR4A8P0C604 315 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 FAM157BP0CG42 384 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 NR2C1P13056 603 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 CCNOP22674 350 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 NR4A1P22736 598 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 NOS3P29474 1203 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 HSF2Q03933 536 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 SNTB2Q13425 540 aaKnown RBP11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 DAG1Q14118 895 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 MEP1BQ16820 701 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 NRN1LQ496H8 165 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 ZNF362Q5T0B9 420 aaPredicted RBP11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 ZNF774Q6NX45 483 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 ZNF544Q6NX49 715 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 JAZF1Q86VZ6 243 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 LRRC75A-AS1Q8N1F1 130 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 CYB561A3Q8NBI2 242 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 SLC30A7Q8NEW0 376 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 OR4F15Q8NGB8 312 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 FNDC8Q8TC99 324 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 ZNRF4Q8WWF5 429 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 C11orf40Q8WZ69 217 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 KCNN2Q9H2S1 579 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 RPRD1BQ9NQG5 326 aaKnown RBP11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 FAIMQ9NVQ4 179 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 DNAJB9Q9UBS3 223 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 REV1Q9UBZ9 1251 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 FZR1Q9UM11 496 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 ACANP16112 2415 aa11.94□□□□□ -0.5
TSPAN3-205ENST00000558745 LOC100509620A0A075B734 347 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 TMEM129A0AVI4 362 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 AHCYL1O43865 530 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 E2F6O75461 281 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 LY6HO94772 140 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 CST2P09228 141 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 APEHP13798 732 aaKnown RBP11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 PAX1P15863 534 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 HOXB4P17483 251 aaPredicted RBP11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 MSR1P21757 451 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 SERPINF1P36955 418 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 ERVS71-1P61550 626 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 SWI5Q1ZZU3 235 aa11.93□□□□□ -0.5
TSPAN3-205ENST00000558745 ADCK1Q86TW2 530 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms