RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 SEC61A2Q9H9S3 476 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 TMEM38BQ9NVV0 291 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 ERVK13-1Q9NX77 482 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 TINAGQ9UJW2 476 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 PROCRQ9UNN8 238 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 CAB39Q9Y376 341 aaPredicted RBP13.11□□□□□ -0.31
VPS18-202ENST00000558474 USP24Q9UPU5 2620 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 TVP23AA6NH52 213 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 C12orf71A8MTZ7 269 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 SELENOFO60613 162 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 FARS2O95363 451 aaKnown RBP13.1□□□□□ -0.31
VPS18-202ENST00000558474 MRPL3P09001 348 aaKnown RBP13.1□□□□□ -0.31
VPS18-202ENST00000558474 SMIM18P0DKX4 95 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 JUNBP17275 347 aaPredicted RBP13.1□□□□□ -0.31
VPS18-202ENST00000558474 PCMT1P22061 227 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 CDH15P55291 814 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 ACTA2P62736 377 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 ACTG2P63267 376 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 TGFBR3Q03167 851 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 EMX1Q04741 257 aaPredicted RBP13.1□□□□□ -0.31
VPS18-202ENST00000558474 EGR3Q06889 387 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 PMPCAQ10713 525 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 C1QTNF12Q5T7M4 302 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 TMPRSS11AQ6ZMR5 421 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 LINGO2Q7L985 606 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 KCTD20Q7Z5Y7 419 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 NANOGP1Q8N7R0 232 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 GALNT11Q8NCW6 608 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 OR10H4Q8NGA5 316 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 OR6N2Q8NGY6 317 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 OR52N1Q8NH53 320 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 SGCDQ92629 289 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 NABP1Q96AH0 204 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 CDADC1Q9BWV3 514 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 ACOT13Q9NPJ3 140 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 CYB5R1Q9UHQ9 305 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 LAMP5Q9UJQ1 280 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 MEMO1Q9Y316 297 aa13.1□□□□□ -0.31
VPS18-202ENST00000558474 TPRP12270 2363 aaKnown RBP13.09□□□□□ -0.31
VPS18-202ENST00000558474 ZGRF1Q86YA3 2104 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 TRGV8A0A0C4DH27 118 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 MYL12BO14950 172 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 CST2P09228 141 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 LIMS3P0CW19 117 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 LIMS4P0CW20 117 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 OR8G3PP0DMU2 310 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 HOXB1P14653 301 aaPredicted RBP13.09□□□□□ -0.31
VPS18-202ENST00000558474 ALOX5APP20292 161 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 NAA10P41227 235 aaPredicted RBP13.09□□□□□ -0.31
VPS18-202ENST00000558474 NR1H2P55055 460 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 PCBD1P61457 104 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 SIRPAP78324 504 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 FAPQ12884 760 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 FOXF2Q12947 444 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 MRPL28Q13084 256 aaKnown RBP13.09□□□□□ -0.31
VPS18-202ENST00000558474 AQP6Q13520 282 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 P2RY6Q15077 328 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 UBE2UQ5VVX9 321 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 SLC18B1Q6NT16 456 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 TMEM154Q6P9G4 183 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 VWA1Q6PCB0 445 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 KCTD18Q6PI47 426 aaPredicted RBP13.09□□□□□ -0.31
VPS18-202ENST00000558474 DEGS2Q6QHC5 323 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 DPY19L4Q7Z388 723 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 BTLAQ7Z6A9 289 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 ALPK2Q86TB3 2170 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 CCDC36Q8IYA8 594 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 SYS1Q8N2H4 156 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 SLC22A24Q8N4F4 322 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 RPRMLQ8N4K4 120 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 KLHL36Q8N4N3 616 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 C1orf162Q8NEQ5 155 aaPredicted RBP13.09□□□□□ -0.31
VPS18-202ENST00000558474 RND1Q92730 232 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 ZNF649Q9BS31 505 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 KCNN2Q9H2S1 579 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 ISYNA1Q9NPH2 558 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 TAS2R16Q9NYV7 291 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 PRSS50Q9UI38 385 aa13.09□□□□□ -0.31
VPS18-202ENST00000558474 SVILO95425 2214 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 A0A1W2PQL4 384 aaPredicted RBP13.08□□□□□ -0.32
VPS18-202ENST00000558474 MSTNO14793 375 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 SULT1C4O75897 302 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 APOL3O95236 402 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 GPANK1O95872 356 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 ATP6V1B1P15313 513 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 COX5AP20674 150 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 EDNRAP25101 427 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 CDAP32320 146 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 ETV1P50549 477 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 WNT4P56705 351 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 PIGFQ07326 219 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 ACSM1Q08AH1 577 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 SGCAQ16586 387 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 CDONQ4KMG0 1287 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 MTFR2Q6P444 385 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 ANKRD16Q6P6B7 361 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 LYPD4Q6UWN0 246 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 PLEKHG7Q6ZR37 379 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 KCTD8Q6ZWB6 473 aa13.08□□□□□ -0.32
VPS18-202ENST00000558474 ZNF367Q7RTV3 350 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms