RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 ZNF426Q9BUY5 554 aa9.17□□□□□ -0.94
TPM1-212ENST00000558347 C11orf54Q9H0W9 315 aaPredicted RBP9.17□□□□□ -0.94
TPM1-212ENST00000558347 KCNN2Q9H2S1 579 aa9.17□□□□□ -0.94
TPM1-212ENST00000558347 PPP1R3EQ9H7J1 279 aa9.17□□□□□ -0.94
TPM1-212ENST00000558347 PTGES2Q9H7Z7 377 aa9.17□□□□□ -0.94
TPM1-212ENST00000558347 C12orf10Q9HB07 376 aa9.17□□□□□ -0.94
TPM1-212ENST00000558347 CRIM1Q9NZV1 1036 aa9.17□□□□□ -0.94
TPM1-212ENST00000558347 JKAMPQ9P055 326 aa9.17□□□□□ -0.94
TPM1-212ENST00000558347 SLC7A7Q9UM01 511 aa9.17□□□□□ -0.94
TPM1-212ENST00000558347 BAIAP2Q9UQB8 552 aa9.17□□□□□ -0.94
TPM1-212ENST00000558347 N6AMT1Q9Y5N5 214 aa9.17□□□□□ -0.94
TPM1-212ENST00000558347 ZNF469Q96JG9 3925 aaPredicted RBP9.17□□□□□ -0.94
TPM1-212ENST00000558347 OR2M5A3KFT3 312 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 CENPXA8MT69 81 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 H3BML4 177 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 IL18BPO95998 194 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 PEPDP12955 493 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 POU3F2P20265 443 aaPredicted RBP9.16□□□□□ -0.94
TPM1-212ENST00000558347 MYL9P24844 172 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 OPRM1P35372 400 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 RBM34P42696 430 aaKnown RBP9.16□□□□□ -0.94
TPM1-212ENST00000558347 KIR2DL3P43628 341 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 GPR4P46093 362 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 TGM4P49221 684 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 EVX1P49640 407 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 SUCLG1P53597 346 aaKnown RBP9.16□□□□□ -0.94
TPM1-212ENST00000558347 TAS2R43P59537 309 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 CBFBQ13951 182 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 CLEC12AQ5QGZ9 265 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 TRIQKQ629K1 86 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 NIPAL3Q6P499 406 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 LINC00114Q6XXX2 140 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 MEPCEQ7L2J0 689 aaKnown RBP9.16□□□□□ -0.94
TPM1-212ENST00000558347 LHFPL3Q86UP9 236 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 LNX2Q8N448 690 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 ACBD7Q8N6N7 88 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 C19orf18Q8NEA5 215 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 DUSP18Q8NEJ0 188 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 OR4F15Q8NGB8 312 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 ENKURQ8TC29 256 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 FANK1Q8TC84 345 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 TMEM255BQ8WV15 326 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 SPRYD4Q8WW59 207 aaPredicted RBP9.16□□□□□ -0.94
TPM1-212ENST00000558347 CAPSLQ8WWF8 208 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 SLC7A6Q92536 515 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 NRGNQ92686 78 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 INTS12Q96CB8 462 aaKnown RBP9.16□□□□□ -0.94
TPM1-212ENST00000558347 SAMD8Q96LT4 415 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 KLHDC3Q9BQ90 382 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 TRAF4Q9BUZ4 470 aaPredicted RBP9.16□□□□□ -0.94
TPM1-212ENST00000558347 ADAM19Q9H013 955 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 RNF121Q9H920 327 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 HINT3Q9NQE9 182 aaKnown RBP9.16□□□□□ -0.94
TPM1-212ENST00000558347 RPS6KB2Q9UBS0 482 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 ANKHD1Q8IWZ3 2542 aaKnown RBP9.16□□□□□ -0.94
TPM1-212ENST00000558347 CCDC168Q8NDH2 2452 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 HEATR5AQ86XA9 2040 aa9.16□□□□□ -0.94
TPM1-212ENST00000558347 SLC22A31A6NKX4 558 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 ETV2O00321 342 aaPredicted RBP9.15□□□□□ -0.94
TPM1-212ENST00000558347 BHLHE40O14503 412 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 RNF13O43567 381 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 LALBAP00709 142 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 SLC2A2P11168 524 aaPredicted RBP9.15□□□□□ -0.94
TPM1-212ENST00000558347 PAICSP22234 425 aaKnown RBP9.15□□□□□ -0.94
TPM1-212ENST00000558347 NR4A2P43354 598 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 MAP2K3P46734 347 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 CTBP2P56545 445 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 CLDN20P56880 219 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 ALG10BQ5I7T1 473 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 HACD4Q5VWC8 232 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 CNIH2Q6PI25 160 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 WDR88Q6ZMY6 472 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 TMPRSS11FQ6ZWK6 438 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 LUZP2Q86TE4 346 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 MEX3DQ86XN8 651 aaKnown RBP9.15□□□□□ -0.94
TPM1-212ENST00000558347 CPOQ8IVL8 374 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 CDK20Q8IZL9 346 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 CADM2Q8N3J6 435 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 SYT14Q8NB59 555 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 GPR119Q8TDV5 335 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 TMEM239Q8WW34 195 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 OTULINQ96BN8 352 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 C3orf49Q96BT1 292 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 ZFP3Q96NJ6 502 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 PIGQQ9BRB3 760 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 SFXN3Q9BWM7 321 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 TMEM165Q9HC07 324 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 CMC2Q9NRP2 79 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 RBFOX1Q9NWB1 397 aaKnown RBP9.15□□□□□ -0.94
TPM1-212ENST00000558347 BABAM2Q9NXR7 383 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 KLHL21Q9UJP4 597 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 FOXD3Q9UJU5 478 aaPredicted RBP9.15□□□□□ -0.94
TPM1-212ENST00000558347 VDAC3Q9Y277 283 aa9.15□□□□□ -0.94
TPM1-212ENST00000558347 A0A087WUJ7 227 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 A0A1W2PNV4 684 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 FAM221AA4D161 298 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 SLC22A20A6NK97 555 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 CENPBD1B2RD01 187 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 PLA2G10O15496 165 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms