RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 DMRTB1Q96MA1 342 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 FYTTD1Q96QD9 318 aaKnown RBP7.48□□□□□ -1.21
SPG11-209ENST00000558253 RBP7Q96R05 134 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 CMKLR1Q99788 373 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 NRSN2Q9GZP1 204 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 SCPEP1Q9HB40 452 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 CHST11Q9NPF2 352 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 SLC22A11Q9NSA0 550 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 SLCO1C1Q9NYB5 712 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 OR5V1Q9UGF6 321 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 HHLA2Q9UM44 414 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 NPIPA1Q9UND3 350 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 DHDHQ9UQ10 334 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 R4GMQ9 66 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 NUP210LQ5VU65 1888 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 GOLGA4Q13439 2230 aaKnown RBP7.47□□□□□ -1.21
SPG11-209ENST00000558253 MEIKINA0A087WXM9 373 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 A0A1W2PPK0 400 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 TVP23AA6NH52 213 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 C11orf98E9PRG8 122 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 H7C417 338 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 DCTN6O00399 190 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 SOX1O00570 391 aaPredicted RBP7.47□□□□□ -1.21
SPG11-209ENST00000558253 SLC17A2O00624 439 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 MAGEB4O15481 346 aaPredicted RBP7.47□□□□□ -1.21
SPG11-209ENST00000558253 SPARCP09486 303 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 CD3GP09693 182 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 SULT1A3P0DMM9 295 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 SULT1A4P0DMN0 295 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 FGF5P12034 268 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 CPN1P15169 458 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 TAS2R20P59543 309 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 ACTBP60709 375 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 ACTG1P63261 375 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 ADAM8P78325 824 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 EIF3IQ13347 325 aaKnown RBP7.47□□□□□ -1.21
SPG11-209ENST00000558253 IKZF1Q13422 519 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 EIF2B1Q14232 305 aaKnown RBP7.47□□□□□ -1.21
SPG11-209ENST00000558253 EXT1Q16394 746 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 MEP1BQ16820 701 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 WDR38Q5JTN6 314 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 THEM4Q5T1C6 240 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 BCL2L15Q5TBC7 163 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 RAB12Q6IQ22 244 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 PAPD4Q6PIY7 484 aaKnown RBP7.47□□□□□ -1.21
SPG11-209ENST00000558253 CATSPERDQ86XM0 798 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 GLB1L2Q8IW92 636 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 CDH26Q8IXH8 852 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 SPICQ8N5J4 248 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 ESX1Q8N693 406 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 OR6M1Q8NGM8 313 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 CEP76Q8TAP6 659 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 SAP25Q8TEE9 199 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 TSEN15Q8WW01 171 aaKnown RBP7.47□□□□□ -1.21
SPG11-209ENST00000558253 ASB10Q8WXI3 467 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 TSSK2Q96PF2 358 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 OR6C1Q96RD1 312 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 GFI1Q99684 422 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 NUDT22Q9BRQ3 303 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 RTN4RQ9BZR6 473 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 PTGES2Q9H7Z7 377 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 MOB1AQ9H8S9 216 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 HRASLSQ9HDD0 168 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 ANKRD10Q9NXR5 420 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 PPP4R1LQ9P1A2 415 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 CTSFQ9UBX1 484 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 MTFP1Q9UDX5 166 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 SCP2D1Q9UJQ7 156 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 RPH3AQ9Y2J0 694 aaPredicted RBP7.47□□□□□ -1.21
SPG11-209ENST00000558253 KLHDC2Q9Y2U9 406 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 HDGFL3Q9Y3E1 203 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 NPTNQ9Y639 398 aa7.47□□□□□ -1.21
SPG11-209ENST00000558253 LOC102723996A0A087X1L8 192 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 TRBV11-1A0A0K0K1C0 115 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 GGT3PA6NGU5 568 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 LIPT2A6NK58 231 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 CCDC85CA6NKD9 419 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 A8MV72 311 aaPredicted RBP7.46□□□□□ -1.22
SPG11-209ENST00000558253 PRR32B1ATL7 298 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 MS4A18H0YCH9 400 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 ADAM10O14672 748 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 ATXN7O15265 892 aaPredicted RBP7.46□□□□□ -1.22
SPG11-209ENST00000558253 TLX3O43711 291 aaPredicted RBP7.46□□□□□ -1.22
SPG11-209ENST00000558253 ICMTO60725 284 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 NDUFB6O95139 128 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 IGHEP01854 428 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 ERCC1P07992 297 aaPredicted RBP7.46□□□□□ -1.22
SPG11-209ENST00000558253 MELTFP08582 738 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 IFNGR1P15260 489 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 ADRA2CP18825 462 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 RAB6AP20340 208 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 CDK2P24941 298 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 RCVRNP35243 200 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 KIR3DL2P43630 455 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 SRP9P49458 86 aaKnown RBP7.46□□□□□ -1.22
SPG11-209ENST00000558253 GSK3AP49840 483 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 HSF1Q00613 529 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 TLE3Q04726 772 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 TNP2Q05952 138 aa7.46□□□□□ -1.22
SPG11-209ENST00000558253 DMWDQ09019 674 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms