RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 STAC2Q6ZMT1 411 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PHYKPLQ8IUZ5 450 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PPT2Q9UMR5 302 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 TNRQ92752 1358 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 FZD6O60353 706 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM234Q8WY98 164 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 EID2BQ96D98 161 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 CGGBP1Q9UFW8 167 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ADM5C9JUS6 153 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 E5RGE8 158 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 IL33O95760 270 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 GUCA2AQ02747 115 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ELAVL3Q14576 367 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 DLK2Q6UY11 383 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 FIBINQ8TAL6 211 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 NEIL2Q969S2 332 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ATOH8Q96SQ7 321 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 NSG2Q9Y328 171 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 OVOS2A0A0J9YW53 1432 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 OVOS2Q6IE36 1432 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 CHST1O43916 411 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 GALTP07902 379 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 LTB4RQ15722 352 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 CHST14Q8NCH0 376 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ADGRL3Q9HAR2 1447 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 NEURL1O76050 574 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 OR10J4P0C629 311 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 TRNP1Q6NT89 227 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 MPC2O95563 127 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 HMGN2P05204 90 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 PRSS1P07477 247 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 ATXN1LP0C7T5 689 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 EID2Q8N6I1 236 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 RPUSD4Q96CM3 377 aaKnown RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 CCNL2Q96S94 520 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-248ENST00000558190 DMRT1Q9Y5R6 373 aa3.39□□□□□ -1.87
ATXN3-248ENST00000558190 CLDN34H7C241 214 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 ADAMTS4O75173 837 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 ACER2Q5QJU3 275 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 AFMIDQ63HM1 303 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 A0A1W2PQ45 241 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 A0A1W2PQY0 241 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 DDTP30046 118 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 SURF2Q15527 256 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 GUCA2BQ16661 112 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 ARSJQ5FYB0 599 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 DHRS7BQ6IAN0 325 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 WDFY1Q8IWB7 410 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 CCDC71LQ8N9Z2 235 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM229BQ8NBD8 167 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 MS4A4AQ96JQ5 239 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 CXorf58Q96LI9 332 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 C1QTNF3Q9BXJ4 246 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 MMP26Q9NRE1 261 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 A4GNTQ9UNA3 340 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 SYNJ1O43426 1573 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 OR52A4PA6NMU1 304 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 TSFMP43897 325 aaKnown RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 Q499Y3 187 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 C2orf27AQ580R0 203 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 BORCS8Q96FH0 119 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 RNF181Q9P0P0 153 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 RECKO95980 971 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 RPS16P62249 146 aaKnown RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF85Q03923 595 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 CALHM3Q86XJ0 350 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 FAM131CQ96AQ9 280 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 LMLNQ96KR4 655 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 A4GALTQ9NPC4 353 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 C1orf123Q9NWV4 160 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 IL17CQ9P0M4 197 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 A0A0U1RQF3 1178 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM129A0AVI4 362 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 CST7O76096 145 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 SOD1P00441 154 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 FGF9P31371 208 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 GALR1P47211 349 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM33P57088 247 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 NCR3LG1Q68D85 454 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 OR10A7Q8NGE5 316 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 PDXPQ96GD0 296 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 OR51I2Q9H344 312 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 B3GAT2Q9NPZ5 323 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF337Q9Y3M9 751 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 ZAR1LA6NP61 321 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 GLSO94925 669 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 NOVA1P51513 510 aaKnown RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 PMPCAQ10713 525 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF626Q68DY1 528 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 TOMM20LQ6UXN7 152 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 MARCH1Q8TCQ1 289 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 CD200R1Q8TD46 325 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 PACRGQ96M98 296 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-248ENST00000558190 OR52A1Q9UKL2 312 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 GABRQQ9UN88 632 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 RNF212BA8MTL3 300 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 ARPC3O15145 178 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 B3GALT4O96024 378 aa3.38□□□□□ -1.87
ATXN3-248ENST00000558190 HOXA5P20719 270 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms