RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 CEACAM16Q2WEN9 425 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 SLC25A35Q3KQZ1 300 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 LINC01590Q5TEZ4 76 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 FAM27BQ5VT28 67 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 SLC18B1Q6NT16 456 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 ZNF544Q6NX49 715 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 ANKRD16Q6P6B7 361 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 ZNF773Q6PK81 442 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 SEM1Q6ZVN7 128 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 AHSA2Q719I0 299 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 ERI1Q8IV48 349 aaKnown RBP10.94□□□□□ -0.66
TPM1-209ENST00000558072 C17orf78Q8N4C9 275 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 BBS1Q8NFJ9 593 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 SLC26A10Q8NG04 563 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 TSPAN14Q8NG11 270 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 OR51G2Q8NGK0 314 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 STARD4Q96DR4 205 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 LGALS12Q96DT0 336 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 ZMYND19Q96E35 227 aaPredicted RBP10.94□□□□□ -0.66
TPM1-209ENST00000558072 BOD1Q96IK1 185 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 TSSK2Q96PF2 358 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 DMRTA2Q96SC8 542 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 HCAR1Q9BXC0 346 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 CDCA4Q9BXL8 241 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 OBP2BQ9NPH6 170 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 POLE4Q9NR33 117 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 GALNT8Q9NY28 637 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 SCOCQ9UIL1 159 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 LAMP5Q9UJQ1 280 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 COL6A6A6NMZ7 2263 aa10.94□□□□□ -0.66
TPM1-209ENST00000558072 PHF3Q92576 2039 aaKnown RBP10.93□□□□□ -0.66
TPM1-209ENST00000558072 DAPL1A0PJW8 107 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 CIB4A0PJX0 185 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 TRIM64A6NGJ6 449 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 ZNF593O00488 134 aaPredicted RBP10.93□□□□□ -0.66
TPM1-209ENST00000558072 SMNDC1O75940 238 aaKnown RBP eCLIP10.93□□□□□ -0.661e-8■■□□□ 11.9
TPM1-209ENST00000558072 IGHA1P01876 353 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 RPSAP08865 295 aaKnown RBP10.93□□□□□ -0.66
TPM1-209ENST00000558072 CST2P09228 141 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 CLUP10909 449 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 CHRNB4P30926 498 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 FMODQ06828 376 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 EGR3Q06889 387 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 SCRN3Q0VDG4 424 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 FAPQ12884 760 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 AQP6Q13520 282 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 SGCAQ16586 387 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 PCK2Q16822 640 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 SLC36A2Q495M3 483 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 LAIR2Q6ISS4 152 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 DEGS2Q6QHC5 323 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 ZNF813Q6ZN06 617 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 PLEKHG7Q6ZR37 379 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.93□□□□□ -0.66
TPM1-209ENST00000558072 BCDIN3DQ7Z5W3 292 aaKnown RBP10.93□□□□□ -0.66
TPM1-209ENST00000558072 P2RY8Q86VZ1 359 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 WDFY1Q8IWB7 410 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 SLC35F2Q8IXU6 374 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 TIGD4Q8IY51 512 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 GJC3Q8NFK1 279 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 OR10H4Q8NGA5 316 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 OR52I1Q8NGK6 324 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 OR6N2Q8NGY6 317 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 KISS1RQ969F8 398 aaPredicted RBP10.93□□□□□ -0.66
TPM1-209ENST00000558072 ALKBH3Q96Q83 286 aaPredicted RBP10.93□□□□□ -0.66
TPM1-209ENST00000558072 MND1Q9BWT6 205 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 MRPS26Q9BYN8 205 aaKnown RBP10.93□□□□□ -0.66
TPM1-209ENST00000558072 CCDC90BQ9GZT6 254 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 OR10A4Q9H209 315 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 C1orf198Q9H425 327 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 ADGRL4Q9HBW9 690 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 AMBNQ9NP70 447 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 TMEM38BQ9NVV0 291 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 COMMD3-BMI1R4GMX3 469 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 ARHGAP21Q5T5U3 1957 aa10.93□□□□□ -0.66
TPM1-209ENST00000558072 ALPK2Q86TB3 2170 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 DCTN6O00399 190 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 MYL12BO14950 172 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 ZNF254O75437 659 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 SULT1C4O75897 302 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 TOXO94900 526 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 UBL3O95164 117 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 CGAP01215 116 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 PTHP01270 115 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 APOC1P02654 83 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 GAAP10253 952 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 AGAP20933 346 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 NTF4P34130 210 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 ARR3P36575 388 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 ECH1Q13011 328 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 GALEQ14376 348 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 C4orf17Q53FE4 359 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 TMEM53Q6P2H8 277 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 KLHL24Q6TFL4 600 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 SLC16A14Q7RTX9 510 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 BTLAQ7Z6A9 289 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 MED12LQ86YW9 2145 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 ALDH16A1Q8IZ83 802 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 SLC22A24Q8N4F4 322 aa10.92□□□□□ -0.66
TPM1-209ENST00000558072 KLHL36Q8N4N3 616 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms