RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 TMEM200AQ86VY9 491 aa10.71□□□□□ -0.69
RCCD1-209ENST00000557750 ZBTB8BQ8NAP8 495 aaPredicted RBP10.71□□□□□ -0.69
RCCD1-209ENST00000557750 CYB561A3Q8NBI2 242 aa10.71□□□□□ -0.69
RCCD1-209ENST00000557750 HTRA1Q92743 480 aa10.71□□□□□ -0.69
RCCD1-209ENST00000557750 BCL2L2Q92843 193 aaPredicted RBP10.71□□□□□ -0.69
RCCD1-209ENST00000557750 NUAK2Q9H093 628 aa10.71□□□□□ -0.69
RCCD1-209ENST00000557750 RIBC2Q9H4K1 309 aa10.71□□□□□ -0.69
RCCD1-209ENST00000557750 SEC61A2Q9H9S3 476 aa10.71□□□□□ -0.69
RCCD1-209ENST00000557750 RPRD1BQ9NQG5 326 aaKnown RBP10.71□□□□□ -0.69
RCCD1-209ENST00000557750 SLC17A5Q9NRA2 495 aa10.71□□□□□ -0.69
RCCD1-209ENST00000557750 TMEM38BQ9NVV0 291 aa10.71□□□□□ -0.69
RCCD1-209ENST00000557750 KCNN3Q9UGI6 736 aa10.71□□□□□ -0.69
RCCD1-209ENST00000557750 AKAP6Q13023 2319 aa10.71□□□□□ -0.7
RCCD1-209ENST00000557750 VPS13CQ709C8 3753 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 A0A1W2PPL8 197 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 CCDC160A6NGH7 325 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 FARS2O95363 451 aaKnown RBP10.7□□□□□ -0.7
RCCD1-209ENST00000557750 THBDP07204 575 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 CTLA4P16410 223 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 ZNF3P17036 446 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 CDAP32320 146 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 GRK5P34947 590 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 CENPAP49450 140 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 ZNF133P52736 654 aaPredicted RBP10.7□□□□□ -0.7
RCCD1-209ENST00000557750 TUBA1BP68363 451 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 TUBA4AP68366 448 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 PTGES3Q15185 160 aaKnown RBP10.7□□□□□ -0.7
RCCD1-209ENST00000557750 ETFDHQ16134 617 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 LRRC36Q1X8D7 754 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 ACSM5Q6NUN0 579 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 DNM1P34Q6PK57 102 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 TUBA1AQ71U36 451 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 ERI1Q8IV48 349 aaKnown RBP10.7□□□□□ -0.7
RCCD1-209ENST00000557750 SLC22A24Q8N4F4 322 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 TSSK2Q96PF2 358 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 RBM38Q9H0Z9 239 aaKnown RBP10.7□□□□□ -0.7
RCCD1-209ENST00000557750 NELFAQ9H3P2 528 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 FN3KQ9H479 309 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 SRA1Q9HD15 236 aaKnown RBP10.7□□□□□ -0.7
RCCD1-209ENST00000557750 USE1Q9NZ43 259 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 KLHL21Q9UJP4 597 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 AMDHD2Q9Y303 409 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 HCFC1P51610 2035 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 FREM1Q5H8C1 2179 aa10.7□□□□□ -0.7
RCCD1-209ENST00000557750 ABCA4P78363 2273 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 OR6C68A6NDL8 312 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 KHDRBS3O75525 346 aaKnown RBP10.69□□□□□ -0.7
RCCD1-209ENST00000557750 WNT11O96014 354 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 HMGN1P05114 100 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 HNRNPCP07910 306 aaKnown RBP eCLIP10.69□□□□□ -0.7
RCCD1-209ENST00000557750 OR8G3PP0DMU2 310 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 EPHA2P29317 976 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 CRABP1P29762 137 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 RAD23AP54725 363 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 CDK5Q00535 292 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 APOFQ13790 326 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 CRMP1Q14194 572 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 SGCAQ16586 387 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 ZNF627Q7L945 461 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 SSX8Q7RTT4 187 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 WDR31Q8NA23 367 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 SLC37A3Q8NCC5 494 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 NPEPL1Q8NDH3 523 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 OTULINQ96BN8 352 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 BOD1Q96IK1 185 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 PLEKHA8Q96JA3 519 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 FOXN4Q96NZ1 517 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 SNX18Q96RF0 628 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 SLC29A1Q99808 456 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 C1QTNF6Q9BXI9 259 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 PLGRKTQ9HBL7 147 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 SLC25A19Q9HC21 320 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 NGBQ9NPG2 151 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 OBP2BQ9NPH6 170 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 CMC2Q9NRP2 79 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 UGT2A1Q9Y4X1 527 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 SLC25A15Q9Y619 301 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 ALPK2Q86TB3 2170 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 HLA-HP01893 362 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 TFAP2AP05549 437 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 CD79AP11912 226 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 HOXB1P14653 301 aaPredicted RBP10.69□□□□□ -0.7
RCCD1-209ENST00000557750 NPR2P20594 1047 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 CRYGSP22914 178 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 POLR2IP36954 125 aaKnown RBP10.69□□□□□ -0.7
RCCD1-209ENST00000557750 MRPS34P82930 218 aaKnown RBP10.69□□□□□ -0.7
RCCD1-209ENST00000557750 DBPQ10586 325 aaPredicted RBP10.69□□□□□ -0.7
RCCD1-209ENST00000557750 NPRL3Q12980 569 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 ZIK1Q3SY52 487 aaPredicted RBP10.69□□□□□ -0.7
RCCD1-209ENST00000557750 ZNF362Q5T0B9 420 aaPredicted RBP10.69□□□□□ -0.7
RCCD1-209ENST00000557750 LPCAT4Q643R3 524 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 GLB1L2Q8IW92 636 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 OR6V1Q8N148 313 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 LRRC18Q8N456 261 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 OR9Q1Q8NGQ5 310 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 NANOS1Q8WY41 292 aaKnown RBP10.69□□□□□ -0.7
RCCD1-209ENST00000557750 SLC38A2Q96QD8 506 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 GABARAPL3Q9BY60 117 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 PRRG3Q9BZD7 231 aa10.69□□□□□ -0.7
RCCD1-209ENST00000557750 SIAEQ9HAT2 523 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms