RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 LGALS13Q9UHV8 139 aa2.76□□□□□ -1.97
EFCAB11-213ENST00000557685 MRPS18BQ9Y676 258 aaKnown RBP2.76□□□□□ -1.97
EFCAB11-213ENST00000557685 IGLV3-16A0A075B6K0 115 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 CIB4A0PJX0 185 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 SPECC1L-ADORA2AF8WAN1 911 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 DPM1O60762 260 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 GNAO1P09471 354 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 EIF2S2P20042 333 aaKnown RBP2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 CDKN2BP42772 138 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 RPS15P62841 145 aaKnown RBP2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 MXD1Q05195 221 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 ALKBH6Q3KRA9 238 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 PPM1LQ5SGD2 360 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 SPECC1LQ69YQ0 1117 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 TIFABQ6ZNK6 161 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 Q6ZVH6 145 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 SAXO1Q8IYX7 474 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 PRELID2Q8N945 189 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 OR10J6PQ8NGY7 276 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 CREB3L1Q96BA8 519 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 DUS3LQ96G46 650 aaKnown RBP2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 DNAJC1Q96KC8 554 aaKnown RBP2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 KCNJ16Q9NPI9 418 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 HRASLS2Q9NWW9 162 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 ZNF223Q9UK11 482 aaPredicted RBP2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 KLK12Q9UKR0 248 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 TBX21Q9UL17 535 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 CAMTA1Q9Y6Y1 1673 aa2.75□□□□□ -1.97
EFCAB11-213ENST00000557685 MN1Q10571 1320 aaPredicted RBP2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 IGHV3-66A0A0C4DH42 116 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 SNAI2O43623 268 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 ANGPTL7O43827 346 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 CHST1O43916 411 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 MYL2P10916 166 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 CCNB1P14635 433 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 GPX4P36969 197 aaPredicted RBP2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 STXBP1P61764 594 aaKnown RBP2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 MERTKQ12866 999 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 MADCAM1Q13477 382 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 ZSCAN26Q16670 478 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 PGGHGQ32M88 737 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 SOHLH1Q5JUK2 328 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 THEM4Q5T1C6 240 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 HES5Q5TA89 166 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 TTC23LQ6PF05 361 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 C12orf56Q8IXR9 622 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 CMTM1Q8IZ96 169 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 NOXO1Q8NFA2 376 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 OR52K2Q8NGK3 314 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 PANX1Q96RD7 426 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 PARP12Q9H0J9 701 aaKnown RBP2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 NEUROG2Q9H2A3 272 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 EXO5Q9H790 373 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 GEMIN7Q9H840 131 aaKnown RBP2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 TMEM165Q9HC07 324 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 SLC40A1Q9NP59 571 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 ISYNA1Q9NPH2 558 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 GCNT4Q9P109 453 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 ST3GAL6Q9Y274 331 aa2.74□□□□□ -1.97
EFCAB11-213ENST00000557685 COL22A1Q8NFW1 1626 aaPredicted RBP2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 TRBV9A0A0B4J1U6 114 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 LYRM9A8MSI8 78 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 CACNG3O60359 315 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 HUS1O60921 280 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 SPAG7O75391 227 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 FABP3P05413 133 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 RAB3BP20337 219 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 GALP22466 123 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 F2RP25116 425 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 GTF2E2P29084 291 aaKnown RBP2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 LONP1P36776 959 aaKnown RBP2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 CEACAM6P40199 344 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 LIPEQ05469 1076 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 SELENBP1Q13228 472 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 SF3A2Q15428 464 aaKnown RBP2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 UBE2SQ16763 222 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 KCTD19Q17RG1 926 aaPredicted RBP2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 SSX9Q7RTT3 188 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 TMEM150AQ86TG1 271 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 CCDC148Q8NFR7 591 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 OR2A1Q8NGT9 310 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 OR5B3Q8NH48 314 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 C8orf44Q96CB5 159 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 SEH1LQ96EE3 360 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 BMFQ96LC9 184 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 GSDMAQ96QA5 445 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 LZTS2Q9BRK4 669 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 C11orf70Q9BRQ4 267 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 PLA2G2FQ9BZM2 168 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 NOX3Q9HBY0 568 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 MYOZ2Q9NPC6 264 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 LYARQ9NX58 379 aaKnown RBP2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 CCDC59Q9P031 241 aaKnown RBP2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 OR12D3Q9UGF7 316 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 PSG8Q9UQ74 426 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 TMED5Q9Y3A6 229 aa2.73□□□□□ -1.97
EFCAB11-213ENST00000557685 A0A1W2PNU3 283 aaPredicted RBP2.72□□□□□ -1.97
EFCAB11-213ENST00000557685 ANKRD63C9JTQ0 380 aa2.72□□□□□ -1.97
EFCAB11-213ENST00000557685 INS-IGF2F8WCM5 200 aa2.72□□□□□ -1.97
EFCAB11-213ENST00000557685 EIF3HO15372 352 aaKnown RBP eCLIP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms