RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 GATSQ8NAP1 163 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 OR4A15Q8NGL6 344 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 FANK1Q8TC84 345 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 CXorf40AQ8TE69 158 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 CA5BP1Q8WTZ4 195 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 ING5Q8WYH8 240 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 ECHDC3Q96DC8 303 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 MED8Q96G25 268 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 HIST1H4GQ99525 98 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF184Q99676 751 aaPredicted RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 C19orf24Q9BVV8 132 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 CHID1Q9BWS9 393 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 UPF3BQ9BZI7 483 aaKnown RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 SELENOIQ9C0D9 397 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 ACTR3CQ9C0K3 210 aaPredicted RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 DRC3Q9H069 523 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 C20orf85Q9H1P6 137 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 Q9H3A6 140 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 GOLPH3Q9H4A6 298 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 SAV1Q9H4B6 383 aaPredicted RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 PTGES2Q9H7Z7 377 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 SAMSN1Q9NSI8 373 aaKnown RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 EURLQ9NYK6 297 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 MDFICQ9P1T7 246 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 SLC17A4Q9Y2C5 497 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 PUS1Q9Y606 427 aaKnown RBP eCLIP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 TDRD15B5MCY1 1934 aaKnown RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 AQRO60306 1485 aaKnown RBP eCLIP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 POLR3AO14802 1390 aaPredicted RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 SYNJ1O43426 1573 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 ADAMTS12P58397 1594 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 A0A1B0GUA9 196 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 FAM231BA6NCW3 169 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 GOLGA8MH3BSY2 632 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 TOR1AO14656 332 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 ITGB1BP1O14713 200 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 MGRN1O60291 552 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 EIF4E2O60573 245 aaKnown RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 LYPLA1O75608 230 aaPredicted RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 HLA-DRAP01903 254 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 IFNW1P05000 195 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 RETP07949 1114 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 OCMP0CE72 109 aaPredicted RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 ZP3P21754 424 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 IL32P24001 234 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 FASP25445 335 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 PSMB6P28072 239 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 IL12BP29460 328 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 HOXA9P31269 272 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 VDAC2P45880 294 aaPredicted RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 NPBWR2P48146 333 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 SSR4P51571 173 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 PRPS1P60891 318 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 IFFO1Q0D2I5 559 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 STX5Q13190 355 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 PIGHQ14442 188 aaPredicted RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 SF3A2Q15428 464 aaKnown RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 GSG1Q2KHT4 349 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 TTMPQ5BVD1 217 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 TMEM31Q5JXX7 168 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 C1orf100Q5SVJ3 147 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 HHATQ5VTY9 493 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 C1orf146Q5VVC0 180 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 H3F3CQ6NXT2 135 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 TMIGD1Q6UXZ0 262 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 MBOAT1Q6ZNC8 495 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF677Q86XU0 584 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 CDC20BQ86Y33 519 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 SELENOHQ8IZQ5 122 aaKnown RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 CMTM8Q8IZV2 173 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 SLC39A11Q8N1S5 342 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 JAGN1Q8N5M9 183 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 TMEM252Q8N6L7 170 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 PRELID2Q8N945 189 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 CCDC71LQ8N9Z2 235 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 HSD17B11Q8NBQ5 300 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 KLHL30-AS1Q8NEE0 82 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 OR10H4Q8NGA5 316 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 OR10G3Q8NGC4 313 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 OR8J2Q8NGG1 315 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 OR51L1Q8NGJ5 315 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 OR9G1Q8NH87 305 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 UBA3Q8TBC4 463 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 FGF14Q92915 247 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 NEIL2Q969S2 332 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 DUS3LQ96G46 650 aaKnown RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF514Q96K75 400 aaPredicted RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 JSRP1Q96MG2 331 aaPredicted RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 GLT1D1Q96MS3 346 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 SIGLEC12Q96PQ1 595 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 OR5B12Q96R08 314 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 KIR2DL4Q99706 377 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 KCTD14Q9BQ13 255 aaPredicted RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 HINT2Q9BX68 163 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 ANGPTL4Q9BY76 406 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 METTL8Q9H825 291 aaKnown RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 SLC38A10Q9HBR0 1119 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 MRM3Q9HC36 420 aaKnown RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 MYOZ2Q9NPC6 264 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 AGPAT4Q9NRZ5 378 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms