RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 NPAS1Q99742 590 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 SLC25A32Q9H2D1 315 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 C1orf198Q9H425 327 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 RASL12Q9NYN1 266 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 TAS2R4Q9NYW5 299 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 PLCL2Q9UPR0 1127 aa10.28□□□□□ -0.76
SRP54-213ENST00000556994 NOP16Q9Y3C1 178 aaKnown RBP10.28□□□□□ -0.76
SRP54-213ENST00000556994 FAM25EA8MYX2 175 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 SPARCP09486 303 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 APEHP13798 732 aaKnown RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 AKR1C2P52895 323 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 SCAND1P57086 179 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 TAS2R19P59542 299 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 MC2RQ01718 297 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 AKR1C1Q04828 323 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 DHRS2Q13268 280 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 SLC17A1Q14916 467 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 ZNF169Q14929 603 aaPredicted RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 JMJD6Q6NYC1 403 aaPredicted RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 CHRDL2Q6WN34 429 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 OOSP2Q86WS3 158 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 MCATQ8IVS2 390 aaKnown RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 ZNF615Q8N8J6 731 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 ZSCAN1Q8NBB4 408 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 TMEM185AQ8NFB2 350 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 CCDC107Q8WV48 283 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 VRK1Q99986 396 aaPredicted RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 ZNF416Q9BWM5 594 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 ZNF471Q9BX82 626 aaPredicted RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 SFXN1Q9H9B4 322 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 BARX1Q9HBU1 254 aaPredicted RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 MSRAQ9UJ68 235 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 B9D1Q9UPM9 204 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 DHDHQ9UQ10 334 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 PLEKHA6Q9Y2H5 1048 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 PCNX3Q9H6A9 2034 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 CDC14CA4D256 554 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 TMEM235A6NFC5 223 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 SCDO00767 359 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 TXNDC12O95881 172 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 GUSBP08236 651 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 HOXC4P09017 264 aaPredicted RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 IFI6P09912 130 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 FREM3P0C091 2139 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 UBBP0CG47 229 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 UBCP0CG48 685 aaKnown RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 HNRNPA2B1P22626 353 aaKnown RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 HTR2CP28335 458 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 ACTBP60709 375 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 RPS27AP62979 156 aaKnown RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 UBA52P62987 128 aaKnown RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 ACTG1P63261 375 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 SPOCK1Q08629 439 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 TMEM225Q6GV28 225 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 BPIFB2Q8N4F0 458 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 ARHGEF39Q8N4T4 335 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 FAM160A2Q8N612 972 aaPredicted RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 LIPHQ8WWY8 451 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 HERVK_113Q902F9 699 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 WNT2BQ93097 391 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 OR8B4Q96RC9 309 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 CMKLR1Q99788 373 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 SLC6A7Q99884 636 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 PELOQ9BRX2 385 aaKnown RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 POTEKPQ9BYX7 375 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 ALX4Q9H161 411 aaPredicted RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 PCDHB16Q9NRJ7 776 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 UBQLN4Q9NRR5 601 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 UPB1Q9UBR1 384 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 EPHA6Q9UF33 1036 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 YBX2Q9Y2T7 364 aaKnown RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 TMEM184BQ9Y519 407 aaPredicted RBP10.27□□□□□ -0.77
SRP54-213ENST00000556994 TMEM14AQ9Y6G1 99 aa10.27□□□□□ -0.77
SRP54-213ENST00000556994 KIF26BQ2KJY2 2108 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 KANTRA0A1W2PQU2 76 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 C5orf67F2Z3F1 127 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 CLDN4O14493 209 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 XKRYO14609 159 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 ZNF264O43296 627 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 SLC16A7O60669 478 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 TPPPO94811 219 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 OR6A2O95222 327 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 HLA-AP01891 365 aaKnown RBP10.26□□□□□ -0.77
SRP54-213ENST00000556994 CA3P07451 260 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 ZNF735P0CB33 412 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 CD34P28906 385 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 ATP1B3P54709 279 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.26□□□□□ -0.77
SRP54-213ENST00000556994 FNDC7Q5VTL7 733 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 GLT8D1Q68CQ7 371 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 FAM109BQ6ICB4 259 aaPredicted RBP10.26□□□□□ -0.77
SRP54-213ENST00000556994 FAM166AQ6J272 317 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 C3orf33Q6P1S2 294 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 UNQ6126/PRO20091Q6UXV3 157 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 RHOUQ7L0Q8 258 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 TAF8Q7Z7C8 310 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 JAGN1Q8N5M9 183 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 OR13H1Q8NG92 308 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 PPP1R1CQ8WVI7 109 aa10.26□□□□□ -0.77
SRP54-213ENST00000556994 ASB5Q8WWX0 329 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms