RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 L7N2F9 121 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 RAB29O14966 203 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 PFDN6O15212 129 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 KMOO15229 486 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 CCDC22O60826 627 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 ZNF780AO75290 641 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 CTAG2O75638 210 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 HSPB1P04792 205 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 KRT16P08779 473 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 RBMY1DP0C7P1 496 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 P0C879 139 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 RBMY1A1P0DJD3 496 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 CCNB1P14635 433 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 ZNF43P17038 809 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 M6PRP20645 277 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 GTF2E2P29084 291 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 FMO3P31513 532 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 PPP1R2P41236 205 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 VDAC2P45880 294 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 RAB9AP51151 201 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 DLX1P56177 255 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 TAS2R19P59542 299 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 MAGOHP61326 146 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 NCALDP61601 193 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 YWHAGP61981 247 aaKnown RBP eCLIP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 ESRRGP62508 458 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 RELAQ04206 551 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 C2orf54Q08AI8 447 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 SMUG1Q53HV7 270 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 GPR157Q5UAW9 335 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 RSBN1Q5VWQ0 802 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 NIPAL1Q6NVV3 410 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 RWDD4Q6NW29 188 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 ZNF774Q6NX45 483 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 CLEC2AQ6UVW9 174 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 ANGPTL8Q6UXH0 198 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 NIPA1Q7RTP0 329 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 PEX26Q7Z412 305 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 NELFCDQ8IXH7 590 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 MICU2Q8IYU8 434 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 SLC7A5P1Q8MH63 180 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 GABRG1Q8N1C3 465 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 EID2Q8N6I1 236 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 ZNF740Q8NDX6 193 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 OR7G1Q8NGA0 311 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 OR6C4Q8NGE1 309 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 RHEBL1Q8TAI7 183 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 SUN5Q8TC36 379 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 CXorf40AQ8TE69 158 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 CDKL2Q92772 493 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 BORCS5Q969J3 196 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 MAGOHBQ96A72 148 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 CEP19Q96LK0 163 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 BIRC8Q96P09 236 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 PLEKHF1Q96S99 279 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 ATP5SQ99766 215 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 SELENOSQ9BQE4 189 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 FAIM2Q9BWQ8 316 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 C20orf85Q9H1P6 137 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 SIAEQ9HAT2 523 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 LY9Q9HBG7 655 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 CRLF2Q9HC73 371 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 C20orf96Q9NUD7 363 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 LYARQ9NX58 379 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 STX18Q9P2W9 335 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 UVRAGQ9P2Y5 699 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 MTRF1LQ9UGC7 380 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 VANGL2Q9ULK5 521 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 UTP11Q9Y3A2 253 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 LMTK2Q8IWU2 1503 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 CPSF1Q10570 1443 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 KDM5AP29375 1690 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 CUL7Q14999 1698 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 DNMBPQ6XZF7 1577 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 IFT140Q96RY7 1462 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 CDC42BPAQ5VT25 1732 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 DISP1Q96F81 1524 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 GOLGA8QA0A0J9YX86 632 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 EPOPA6NHQ4 379 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 C12orf71A8MTZ7 269 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 GOLGA8RI6L899 631 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 M0QX08 132 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 KPNA4O00629 521 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-210ENST00000556718 FKBP6O75344 327 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 SERPINB7O75635 380 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 IGHV2-5P01817 119 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 ERCC1P07992 297 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-210ENST00000556718 ANXA5P08758 320 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 CT62P0C5K7 136 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 OCM2P0CE71 109 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 OCMP0CE72 109 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-210ENST00000556718 OR8G3PP0DMU2 310 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 HPGDP15428 266 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 PRKACBP22694 351 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 IL32P24001 234 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 SLC1A1P43005 524 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 MAGEA1P43355 309 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 TFPI2P48307 235 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 HSPA13P48723 471 aa3.16□□□□□ -1.9
PRPF39-210ENST00000556718 EIF2B2P49770 351 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms