RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ULBP2Q9BZM5 246 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 MED29Q9NX70 200 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 VAPAQ9P0L0 249 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 SLC7A8Q9UHI5 535 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 USH1CQ9Y6N9 552 aa8.54□□□□□ -1.04
SCFD1-220ENST00000556486 V9GYY5 206 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-220ENST00000556486 IGLV3-9A0A075B6K5 115 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 PPIHO43447 177 aaKnown RBP8.53□□□□□ -1.04
SCFD1-220ENST00000556486 TMEM127O75204 238 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 ERLIN1O75477 346 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 RP2O75695 350 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 SEC14L2O76054 403 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 MFN2O95140 757 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 UBL3O95164 117 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 SNAP29O95721 258 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 SERPINA5P05154 406 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 CD79AP11912 226 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 B4GALT1P15291 398 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 ALDH3B1P43353 468 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 CAPZA2P47755 286 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 SEC24CP53992 1094 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 CDH12P55289 794 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 RGS8P57771 180 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-220ENST00000556486 STX1BP61266 288 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 NCALDP61601 193 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 ZP4Q12836 540 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 PMS2P3Q13401 168 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 OR1Q1Q15612 314 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 ALKBH6Q3KRA9 238 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 ZNF613Q6PF04 617 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 DPPA2Q7Z7J5 298 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 RANBP3LQ86VV4 465 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-220ENST00000556486 ZNF584Q8IVC4 421 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 WDFY1Q8IWB7 410 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 LRRC17Q8N6Y2 441 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 OR5AN1Q8NGI8 311 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 OR5J2Q8NH18 312 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 OR6X1Q8NH79 312 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 STON2Q8WXE9 905 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 RDH5Q92781 318 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 TMEM54Q969K7 222 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 YIPF5Q969M3 257 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 SPDL1Q96EA4 605 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 TXNDC15Q96J42 360 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 ZNF607Q96SK3 696 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 ZNF426Q9BUY5 554 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 EMC6Q9BV81 110 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 PCDHAC1Q9H158 963 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 IKZF5Q9H5V7 419 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 TMEM27Q9HBJ8 222 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 TCF7L2Q9NQB0 619 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 ZNF275Q9NSD4 429 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-220ENST00000556486 NKIRAS2Q9NYR9 191 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 NKIRAS1Q9NYS0 192 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 SELENONQ9NZV5 590 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 ZNF346Q9UL40 294 aaKnown RBP8.53□□□□□ -1.04
SCFD1-220ENST00000556486 FZR1Q9UM11 496 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 POFUT2Q9Y2G5 429 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 ARHGAP32A7KAX9 2087 aa8.53□□□□□ -1.04
SCFD1-220ENST00000556486 SLC22A23A1A5C7 686 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 ZNF726A6NNF4 738 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 POLR3GO15318 223 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-220ENST00000556486 CHP2O43745 196 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 MGRN1O60291 552 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 NCR1O76036 304 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 RAB36O95755 333 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 BCL10O95999 233 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 HKR1P10072 659 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 ZNF250P15622 560 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 SLC6A2P23975 617 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 SLC6A9P48067 706 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 PTDSS1P48651 473 aaKnown RBP8.52□□□□□ -1.05
SCFD1-220ENST00000556486 CSNK1A1P48729 337 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 ATP4BP51164 291 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 MAGOHP61326 146 aaKnown RBP8.52□□□□□ -1.05
SCFD1-220ENST00000556486 LMO4P61968 165 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 GALK2Q01415 458 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 RBBP4Q09028 425 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 FOXL1Q12952 345 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 CAMK2DQ13557 499 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 SCARB2Q14108 478 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 RAB39AQ14964 217 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 PAGE3Q5JUK9 113 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 DLEU7Q6UYE1 221 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 WDR88Q6ZMY6 472 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 LRP11Q86VZ4 500 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 ARMC8Q8IUR7 673 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 TEX29Q8N6K0 151 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 SIGLECL1Q8N7X8 197 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 OR6N1Q8NGY5 312 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 MGARPQ8TDB4 240 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 SLC25A44Q96H78 314 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-220ENST00000556486 SEPHS2Q99611 448 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 ARHGDIGQ99819 225 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 PKP2Q99959 881 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 SYT3Q9BQG1 590 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 WFDC6Q9BQY6 131 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 CCDC28BQ9BUN5 200 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 ZNF416Q9BWM5 594 aa8.52□□□□□ -1.05
SCFD1-220ENST00000556486 SLC19A3Q9BZV2 496 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms