RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 CLN3Q13286 438 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 RIN1Q13671 783 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 RTP5Q14D33 572 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 CDK5R1Q15078 307 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 NRARPQ7Z6K4 114 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 CELF2-AS1Q8N7Q2 184 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 MDS2Q8NDY4 140 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 OR13C5Q8NGS8 318 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 OTOSQ8NHW6 89 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 NEIL3Q8TAT5 605 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 KCNE4Q8WWG9 221 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 RNF166Q96A37 237 aaPredicted RBP16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 ZNF552Q9H707 407 aaPredicted RBP16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 MRPS18CQ9Y3D5 142 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 PHF3Q92576 2039 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 SHISA3A0PJX4 238 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 TRABD2BA6NFA1 517 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 OGG1O15527 345 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 RPP14O95059 124 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 HLA-DQB1P01920 261 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 SP1P08047 785 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 SPARCP09486 303 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 PGA4P0DJD7 388 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 PGA3P0DJD8 388 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 EDNRAP25101 427 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 MTNR1BP49286 362 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 CCL11P51671 97 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 ZMAT1Q5H9K5 638 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 HSD17B8Q92506 261 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 MRPL48Q96GC5 212 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 SLC25A44Q96H78 314 aaPredicted RBP16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 TTTY12Q9BZ98 90 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 PPIL3Q9H2H8 161 aaKnown RBP16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 IKZF2Q9UKS7 526 aa16.62■□□□□ 0.25
SDR39U1-218ENST00000556262 TRBV2A0A0J9YWF9 115 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 LOC102725191A0A1B0GVB3 256 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 GJE1A6NN92 205 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 EIF1BO60739 113 aaKnown RBP16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 SLC19A2O60779 497 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 RFX2P48378 723 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 GDI2P50395 445 aaKnown RBP16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 GFRA1P56159 465 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 CLDN15P56746 228 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 CLRN1P58418 232 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 FAM27D1Q5T7N8 215 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 TMEM53Q6P2H8 277 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 YIPF7Q8N8F6 280 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 SMIM19Q96E16 107 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 PDCD1LG2Q9BQ51 273 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 SOSTQ9BQB4 213 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 CDV3Q9UKY7 258 aaKnown RBP16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 RASD1Q9Y272 281 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 BOD1L1Q8NFC6 3051 aa16.61■□□□□ 0.25
SDR39U1-218ENST00000556262 A0A087WV48 116 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 NME2P1O60361 137 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 ABHD16AO95870 558 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 IGHG1P01857 330 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 CSF3P09919 207 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 POU3F2P20265 443 aaPredicted RBP16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 NME2P22392 152 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 AZGP1P25311 298 aaKnown RBP16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 PTGS2P35354 604 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 MAGEA5P43359 124 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 BLVRAP53004 296 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 CAV3P56539 151 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 CLDN17P56750 224 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 SOX8P57073 446 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 NANOS3P60323 173 aaKnown RBP16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 LIPNQ5VXI9 398 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 HBMQ6B0K9 141 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 SLC25A25Q6KCM7 469 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 DNM1P34Q6PK57 102 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 NOXO1Q8NFA2 376 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 SLC26A10Q8NG04 563 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 OR6X1Q8NH79 312 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 ABHD4Q8TB40 342 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 RBP7Q96R05 134 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 ATF6BQ99941 703 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 TIGARQ9NQ88 270 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 SLCO1C1Q9NYB5 712 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 POU2F3Q9UKI9 436 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 CSAG2Q9Y5P2 127 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 TMEM14AQ9Y6G1 99 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 MGAQ8IWI9 3026 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 CDK2AP1O14519 115 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 UPK3AO75631 287 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 MEOX1P50221 254 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 CARD18P57730 90 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 ARG2P78540 354 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 MFAP5Q13361 173 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 PYDC2Q56P42 97 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 RPL22L1Q6P5R6 122 aaKnown RBP16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 SPATC1Q76KD6 591 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 ZNF385AQ96PM9 386 aaKnown RBP16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 MNTQ99583 582 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 NAA11Q9BSU3 229 aaPredicted RBP16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 B4GALT7Q9UBV7 327 aa16.6■□□□□ 0.25
SDR39U1-218ENST00000556262 A0A1B0GTH9 108 aa16.59■□□□□ 0.25
SDR39U1-218ENST00000556262 DCDC2BA2VCK2 349 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms