RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 CCDC126Q96EE4 140 aa1.7□□□□□ -2.14
SCFD1-218ENST00000556256 ZNF578Q96N58 590 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-218ENST00000556256 OR2A5Q96R48 311 aa1.7□□□□□ -2.14
SCFD1-218ENST00000556256 TGS1Q96RS0 853 aaKnown RBP1.7□□□□□ -2.14
SCFD1-218ENST00000556256 PLIN2Q99541 437 aa1.7□□□□□ -2.14
SCFD1-218ENST00000556256 SLC29A1Q99808 456 aa1.7□□□□□ -2.14
SCFD1-218ENST00000556256 PLA2G2FQ9BZM2 168 aa1.7□□□□□ -2.14
SCFD1-218ENST00000556256 IFI27L2Q9H2X8 130 aa1.7□□□□□ -2.14
SCFD1-218ENST00000556256 ANKRA2Q9H9E1 313 aa1.7□□□□□ -2.14
SCFD1-218ENST00000556256 ZNF629Q9UEG4 869 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-218ENST00000556256 USP47Q96K76 1375 aa1.7□□□□□ -2.14
SCFD1-218ENST00000556256 IGHV5-51A0A0C4DH38 117 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 GLYATL1P3A0A0U1RQE8 302 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 ZNF816-ZNF321PA0A0X1KG74 233 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 INS-IGF2F8WCM5 200 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 PPP1R2P9O14990 202 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 CLOCKO15516 846 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 DPM1O60762 260 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 ERLIN1O75477 346 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 RP2O75695 350 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 OR2J3O76001 311 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 OR2F2O95006 317 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 CLIC3O95833 236 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 KRT14P02533 472 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 IGFBP3P17936 291 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-218ENST00000556256 LONP1P36776 959 aaKnown RBP1.69□□□□□ -2.14
SCFD1-218ENST00000556256 GPX4P36969 197 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-218ENST00000556256 PFN3P60673 137 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 ADARB1P78563 741 aaKnown RBP1.69□□□□□ -2.14
SCFD1-218ENST00000556256 TGM3Q08188 693 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 ECH1Q13011 328 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 ZNF726P1Q15940 193 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 HES5Q5TA89 166 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 ABHD13Q7L211 337 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 IQCKQ8N0W5 287 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 OR4C5Q8NGB2 326 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 OR10G2Q8NGC3 310 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 CREB3L1Q96BA8 519 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 BMFQ96LC9 184 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 TSNARE1Q96NA8 513 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 CENPKQ9BS16 269 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 VCXQ9H320 206 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 ISYNA1Q9NPH2 558 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 GPATCH2LQ9NWQ4 482 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 DCAF16Q9NXF7 216 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 ST3GAL6Q9Y274 331 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 GOLT1BQ9Y3E0 138 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 KCNE3Q9Y6H6 103 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 NSD2O96028 1365 aa1.69□□□□□ -2.14
SCFD1-218ENST00000556256 MAPK8IP3Q9UPT6 1336 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 TRBV9A0A0B4J1U6 114 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 C9JVG2 144 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 DNALI1O14645 258 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-218ENST00000556256 RAB3DO95716 219 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 FTH1P02794 183 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 SERPINA5P05154 406 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 ANXA5P08758 320 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 IGHV1-8P0DP01 117 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 ZNF250P15622 560 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 MAS1LP35410 378 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 CDKN2BP42772 138 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 RPS9P46781 194 aaKnown RBP1.68□□□□□ -2.14
SCFD1-218ENST00000556256 CYB561P49447 251 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 RAB10P61026 200 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 C16orf72Q14CZ0 275 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 PON2Q15165 354 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 MRPL23Q16540 153 aaKnown RBP1.68□□□□□ -2.14
SCFD1-218ENST00000556256 HSP90AB3PQ58FF7 597 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 C9orf135Q5VTT2 229 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 Q5W150 140 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 CARD17Q5XLA6 110 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 FBXW12Q6X9E4 464 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 SCD5Q86SK9 330 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 CNPY4Q8N129 248 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 CYB561D1Q8N8Q1 229 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 PRELID2Q8N945 189 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 ZNF502Q8TBZ5 544 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 SLC7A13Q8TCU3 470 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 ZNF681Q96N22 645 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 SERPINB12Q96P63 405 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 PARP12Q9H0J9 701 aaKnown RBP1.68□□□□□ -2.14
SCFD1-218ENST00000556256 UBE2ZQ9H832 354 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-218ENST00000556256 TMEM165Q9HC07 324 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 WFDC1Q9HC57 220 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 NECAP2Q9NVZ3 263 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 OR12D3Q9UGF7 316 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 LGALS13Q9UHV8 139 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 VANGL2Q9ULK5 521 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 LRP4O75096 1905 aa1.68□□□□□ -2.14
SCFD1-218ENST00000556256 IGKV2D-24A0A075B6R9 120 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 IGLV1-36A0A0B4J1U3 117 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 IGHV5-10-1A0A0J9YXX1 117 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 CIB4A0PJX0 185 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 CTAGE15A4D2H0 777 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 LRCOL1A6NCL2 159 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 LRRIQ3A6PVS8 624 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-218ENST00000556256 SIRPB1O00241 398 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 NDUFAB1O14561 156 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 KLHL41O60662 606 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 SPAG7O75391 227 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms