RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 EVC2Q86UK5 1308 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 PRSS37A4D1T9 235 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 TCP11X1B4DZS4 312 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 CDC7O00311 574 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 CLOCKO15516 846 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 BGLAPP02818 100 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 ZDHHC11BP0C7U3 371 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 PABPC4LP0CB38 370 aaKnown RBP3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 CALM1P0DP23 149 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 CALM2P0DP24 149 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 CALM3P0DP25 149 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 CNR1P21554 472 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 AK4P27144 223 aaPredicted RBP3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 RRM2P31350 389 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 OTX1P32242 354 aaPredicted RBP3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 NAA10P41227 235 aaPredicted RBP3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 NSG1P42857 185 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 RPS21P63220 83 aaKnown RBP3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 IRX3P78415 501 aaPredicted RBP3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 ECH1Q13011 328 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 CLINT1Q14677 625 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 PRAMEF20Q5VT98 475 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 LRRC66Q68CR7 880 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 ZNF836Q6ZNA1 936 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 CENPQQ7L2Z9 268 aaPredicted RBP3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 ASCL5Q7RTU5 278 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 SLC34A3Q8N130 599 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 MREGQ8N565 214 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 ACTRT1Q8TDG2 376 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 CD300LFQ8TDQ1 290 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 TSSK3Q96PN8 268 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 P2RX4Q99571 388 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 HDHD3Q9BSH5 251 aaPredicted RBP3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 SLC25A39Q9BZJ4 359 aaPredicted RBP3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 CWH43Q9H720 699 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 VPS37BQ9H9H4 285 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 NEK6Q9HC98 313 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 RAB20Q9NX57 234 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 LSM7Q9UK45 103 aaKnown RBP3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 GCC2Q8IWJ2 1684 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 MROH1Q8NDA8 1641 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 DIP2AQ14689 1571 aa3.55□□□□□ -1.84
CKS1BP1-201ENST00000555221 SPATA31E1Q6ZUB1 1445 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 BRD4O60885 1362 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 A0A075B6Q4 140 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 LRRIQ3A6PVS8 624 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 AIM2O14862 343 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 RAB29O14966 203 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 MRPS12O15235 138 aaKnown RBP3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 SUPT3HO75486 399 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 FTH1P02794 183 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 PLEKP08567 350 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 TOP1P11387 765 aaKnown RBP3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 HMGCS1Q01581 520 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 TGM3Q08188 693 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 TMEM183BQ1AE95 376 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 C9orf135Q5VTT2 229 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 ANKRD26P1Q6NSI1 321 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 CERS6Q6ZMG9 384 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 TMEM183AQ8IXX5 376 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 GTPBP8Q8N3Z3 284 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 ZNF433Q8N7K0 673 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 ACMSDQ8TDX5 336 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 TMEM158Q8WZ71 300 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 KIFAP3Q92845 792 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 MCUR1Q96AQ8 359 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 DNAJC19Q96DA6 116 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 CHP1Q99653 195 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 RACGAP1Q9H0H5 632 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 SLCO1B3Q9NPD5 702 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 ING4Q9UNL4 249 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 PRG3Q9Y2Y8 225 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 WSB1Q9Y6I7 421 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 ZNF142P52746 1687 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 MYO3AQ8NEV4 1616 aa3.54□□□□□ -1.84
CKS1BP1-201ENST00000555221 LTBP1Q14766 1721 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 ROCK2O75116 1388 aaKnown RBP3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 CNTNAP1P78357 1384 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 NFASCO94856 1347 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 CENPJQ9HC77 1338 aaPredicted RBP3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 TRBV11-1A0A0K0K1C0 115 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 LSM1O15116 133 aaKnown RBP3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 OR2J3O76001 311 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 C6orf47O95873 294 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 CXCL5P42830 114 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 CCNA1P78396 465 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 ADARB1P78563 741 aaKnown RBP3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 TTLL9Q3SXZ7 439 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 SPANXN2Q5MJ10 180 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 IGFL2Q6UWQ7 119 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 Q6ZSR3 168 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 FBXL13Q8NEE6 735 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 DUSP18Q8NEJ0 188 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 OR10R2Q8NGX6 335 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 EXOSC8Q96B26 276 aaKnown RBP3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 TGS1Q96RS0 853 aaKnown RBP3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 LINC00597Q9H2U6 94 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 CDC42EP4Q9H3Q1 356 aaKnown RBP3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 RPF2Q9H7B2 306 aaKnown RBP3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 FGF20Q9NP95 211 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms