RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 LIPNQ5VXI9 398 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 OTPQ5XKR4 325 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 ABLIM2Q6H8Q1 611 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 ASPHD2Q6ICH7 369 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 TPRA1Q86W33 373 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 OR2M7Q8NG81 312 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 OR10S1Q8NGN2 331 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 OR6N2Q8NGY6 317 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 CAPSLQ8WWF8 208 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 KCNE4Q8WWG9 221 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 ASB17Q8WXJ9 295 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 ADAD1Q96M93 576 aaKnown RBP7.92□□□□□ -1.14
TDP1-210ENST00000554976 PIGQQ9BRB3 760 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 KCNN2Q9H2S1 579 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 C12orf4Q9NQ89 552 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 DLL3Q9NYJ7 618 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 DKKL1Q9UK85 242 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 RASD1Q9Y272 281 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 DMXL1Q9Y485 3027 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 PSMD9O00233 223 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 SMAD9O15198 467 aaKnown RBP7.92□□□□□ -1.14
TDP1-210ENST00000554976 ZNF254O75437 659 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 GATBO75879 557 aaKnown RBP7.92□□□□□ -1.14
TDP1-210ENST00000554976 PNPP00491 289 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 WT1P19544 449 aaPredicted RBP7.92□□□□□ -1.14
TDP1-210ENST00000554976 CFL1P23528 166 aaKnown RBP7.92□□□□□ -1.14
TDP1-210ENST00000554976 SLC17A1Q14916 467 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 ZNF181Q2M3W8 571 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 YIF1BQ5BJH7 314 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 PHYHD1Q5SRE7 291 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 ATP1A1-AS1Q5TC04 95 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 HBMQ6B0K9 141 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 UEVLDQ8IX04 471 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 RNF128Q8TEB7 428 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 SCMH1Q96GD3 660 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 SLC25A44Q96H78 314 aaPredicted RBP7.92□□□□□ -1.14
TDP1-210ENST00000554976 FOXN4Q96NZ1 517 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 PDCD1LG2Q9BQ51 273 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 SRRQ9GZT4 340 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 TP63Q9H3D4 680 aaPredicted RBP7.92□□□□□ -1.14
TDP1-210ENST00000554976 PNRC2Q9NPJ4 139 aaKnown RBP7.92□□□□□ -1.14
TDP1-210ENST00000554976 LAMP5Q9UJQ1 280 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 TMEM14AQ9Y6G1 99 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 PCNX2A6NKB5 2137 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 TRBV2A0A0J9YWF9 115 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 A0A1B0GTH9 108 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 H0YC42 278 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 NME2P1O60361 137 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 WDPCPO95876 746 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 CD37P11049 281 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 NME2P22392 152 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 EDNRAP25101 427 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 SFTPDP35247 375 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 TPTEP56180 551 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 CLDN20P56880 219 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 OR10A3P58181 314 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 SRSF6Q13247 344 aaKnown RBP7.91□□□□□ -1.14
TDP1-210ENST00000554976 THEM4Q5T1C6 240 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 C10orf128Q5T292 105 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 CREB3L2Q70SY1 520 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 CEACAM19Q7Z692 300 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 CATSPERDQ86XM0 798 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 ZNF454Q8N9F8 522 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 OR52N5Q8NH56 324 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 PHYHIPQ92561 330 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 C4orf45Q96LM5 186 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 DERL3Q96Q80 235 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 TTYH2Q9BSA4 534 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 ABHD6Q9BV23 337 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 EMC6Q9BV81 110 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 HES7Q9BYE0 225 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 ABCB9Q9NP78 766 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 STMN3Q9NZ72 180 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 CYB5R1Q9UHQ9 305 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 ZNF281Q9Y2X9 895 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 NOSIPQ9Y314 301 aaKnown RBP7.91□□□□□ -1.14
TDP1-210ENST00000554976 ARPC4-TTLL3A0A0A6YYG9 625 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 SMIM30A4D0T7 59 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 A6NL46 340 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 ZNF716A6NP11 495 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 SULT2B1O00204 365 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 TNFSF11O14788 317 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 LIPCP11150 499 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 GTF2E2P29084 291 aaKnown RBP7.91□□□□□ -1.14
TDP1-210ENST00000554976 NTF4P34130 210 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 CCR9P51686 369 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 GLO1Q04760 184 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 MFGE8Q08431 387 aaPredicted RBP7.91□□□□□ -1.14
TDP1-210ENST00000554976 MFAP5Q13361 173 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 TGIF1Q15583 401 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 LRFN4Q6PJG9 635 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 IDO2Q6ZQW0 420 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 SULF2Q8IWU5 870 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 ZNF679Q8IYX0 411 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 OR2G2Q8NGZ5 317 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 MRPL48Q96GC5 212 aaKnown RBP7.91□□□□□ -1.14
TDP1-210ENST00000554976 OR2M2Q96R28 347 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 OR14A2Q96R54 314 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 UCN2Q96RP3 112 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 FAM173AQ9BQD7 235 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms