RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 APCDD1LQ8NCL9 501 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 SDR9C7Q8NEX9 313 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 OR4N2Q8NGD1 307 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 OR5M3Q8NGP4 307 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 DOK4Q8TEW6 326 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 SENP5Q96HI0 755 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-216ENST00000554975 TNFRSF13CQ96RJ3 184 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 ATF6BQ99941 703 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 HDHD5Q9BXW7 423 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 RERGLQ9H628 205 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 MED20Q9H944 212 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 NANSQ9NR45 359 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 C14orf119Q9NWQ9 140 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 QPCTLQ9NXS2 382 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 ABRACLQ9P1F3 81 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 COMMD3Q9UBI1 195 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 ZNF221Q9UK13 617 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 DTX4Q9Y2E6 619 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 FAM215AQ9Y5M1 114 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 TMEM14AQ9Y6G1 99 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 A0A0G2JNJ9 132 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 A6NNC1 897 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 ALG1L2C9J202 215 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 J3QLW9 94 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 OGG1O15527 345 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 ITGA10O75578 1167 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 ZNF432O94892 652 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 RAF1P04049 648 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 CLPSP04118 112 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 IGKV3-11P04433 115 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 HIST1H2ABP04908 130 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 TACSTD2P09758 323 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 CSF3P09919 207 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 HIST1H1CP16403 213 aaKnown RBP9.93□□□□□ -0.82
SHMT2-216ENST00000554975 ZNF19P17023 458 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 PTNP21246 168 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 EVX1P49640 407 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 DIO1P49895 249 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 GDI2P50395 445 aaKnown RBP9.93□□□□□ -0.82
SHMT2-216ENST00000554975 SSR4P51571 173 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 PNLIPRP2P54317 469 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 SUMO3P55854 103 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-216ENST00000554975 GPR85P60893 370 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 PITPNAQ00169 270 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 ZNF85Q03923 595 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 EFR3AQ14156 821 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 EBPQ15125 230 aaKnown RBP9.93□□□□□ -0.82
SHMT2-216ENST00000554975 NNATQ16517 81 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 ZNF74Q16587 644 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 PYHIN1Q6K0P9 492 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 SFXN4Q6P4A7 337 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 PLET1Q6UQ28 207 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 HIST3H2AQ7L7L0 130 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 PXKQ7Z7A4 578 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 SULF2Q8IWU5 870 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 UBQLNLQ8IYU4 475 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 OR5M9Q8NGP3 310 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 OR2T4Q8NH00 348 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 MOSPD2Q8NHP6 518 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 ZNF563Q8TA94 476 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 PTPMT1Q8WUK0 201 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-216ENST00000554975 SNX33Q8WV41 574 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 HIST1H2ACQ93077 130 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 TBX5Q99593 518 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 C7orf50Q9BRJ6 194 aaKnown RBP9.93□□□□□ -0.82
SHMT2-216ENST00000554975 DEFB127Q9H1M4 99 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 RPRD1BQ9NQG5 326 aaKnown RBP9.93□□□□□ -0.82
SHMT2-216ENST00000554975 Q9UFV3 132 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 IER3IP1Q9Y5U9 82 aa9.93□□□□□ -0.82
SHMT2-216ENST00000554975 NOTOA8MTQ0 251 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 INAFM1C9JVW0 142 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 MCIDASD6RGH6 385 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 NPIPA2E9PIF3 369 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 NPIPA3F8WFD2 350 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 PRKNO60260 465 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-216ENST00000554975 REM1O75628 298 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 SC5DO75845 299 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 MRPL3P09001 348 aaKnown RBP9.92□□□□□ -0.82
SHMT2-216ENST00000554975 GLI4P10075 376 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 SPI1P17947 270 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 RAB3BP20337 219 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 UQCRC1P31930 480 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 PYCR1P32322 319 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 KIR2DL3P43628 341 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 HTR3AP46098 478 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 RAB25P57735 213 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 CBFBQ13951 182 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 MFSD13AQ14CX5 517 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 GXYLT1Q4G148 440 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 ALG10Q5BKT4 473 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 RSBN1Q5VWQ0 802 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-216ENST00000554975 BICRALQ6AI39 1079 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 RTL6Q6ICC9 239 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 TMEM91Q6ZNR0 172 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 C16orf47Q6ZP98 133 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-216ENST00000554975 SLC16A9Q7RTY1 509 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 NRARPQ7Z6K4 114 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 RDH10Q8IZV5 341 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 Q8N402 240 aa9.92□□□□□ -0.82
SHMT2-216ENST00000554975 C10orf53Q8N6V4 93 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms