RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PMP2P02689 132 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 RNH1P13489 461 aaKnown RBP14.2□□□□□ -0.14
SYNE3-203ENST00000554873 F3P13726 295 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 HSD17B7P56937 341 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 NHLH2Q02577 135 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 OR8G1Q15617 311 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 PRRT3Q5FWE3 981 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 SLC48A1Q6P1K1 146 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 OR8S1Q8NH09 359 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 ARMC5Q96C12 935 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 POTEKPQ9BYX7 375 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 C6orf106Q9H6K1 298 aaPredicted RBP14.2□□□□□ -0.14
SYNE3-203ENST00000554873 SLC7A7Q9UM01 511 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 SNRNP200O75643 2136 aaKnown RBP14.2□□□□□ -0.14
SYNE3-203ENST00000554873 EDDM13A0A1B0GTR0 161 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 UNC119BA6NIH7 251 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 MKRN2OSH3BPM6 223 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 H7C1Q1 480 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 FUT1P19526 365 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 C5AR1P21730 350 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 AQP2P41181 271 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 NDUFA6P56556 154 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 HTRA4P83105 476 aaPredicted RBP14.19□□□□□ -0.14
SYNE3-203ENST00000554873 ELAVL3Q14576 367 aaKnown RBP14.19□□□□□ -0.14
SYNE3-203ENST00000554873 RFLNBQ8N5W9 214 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 ADAMTS17Q8TE56 1095 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 DVL3Q92997 716 aaPredicted RBP14.19□□□□□ -0.14
SYNE3-203ENST00000554873 FOXRED1Q96CU9 486 aaPredicted RBP14.19□□□□□ -0.14
SYNE3-203ENST00000554873 DOCK9Q9BZ29 2069 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 TRPM6Q9BX84 2022 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 M0R036 132 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 LATO43561 262 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 NR2C1P13056 603 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 BMP7P18075 431 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 MAOAP21397 527 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 SLC2A5P22732 501 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 CLDN2P57739 230 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 GUCA2AQ02747 115 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 LTBQ06643 244 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 PNLDC1Q8NA58 520 aaKnown RBP14.19□□□□□ -0.14
SYNE3-203ENST00000554873 CLEC1AQ8NC01 280 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 ZNF681Q96N22 645 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 S100A13Q99584 98 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 RGCCQ9H4X1 137 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 LMAN1LQ9HAT1 526 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 CALML5Q9NZT1 146 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 MDC1Q14676 2089 aaKnown RBP14.19□□□□□ -0.14
SYNE3-203ENST00000554873 IGLON5A6NGN9 336 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 MARCH11A6NNE9 402 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 KCNAB3O43448 404 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 DAOP14920 347 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 TEAD1P28347 426 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 P2RY2P41231 377 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 TSPAN7P41732 249 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 HSD11B2P80365 405 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 NOGQ13253 232 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 AGERQ15109 404 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 PPA1Q15181 289 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 YOD1Q5VVQ6 348 aaPredicted RBP14.19□□□□□ -0.14
SYNE3-203ENST00000554873 C19orf47Q8N9M1 422 aaKnown RBP14.19□□□□□ -0.14
SYNE3-203ENST00000554873 SLC16A11Q8NCK7 471 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 LCN9Q8WX39 176 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 MAFIPQ8WZ33 124 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 RAB24Q969Q5 203 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 SPOCK3Q9BQ16 436 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 SUCNR1Q9BXA5 334 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 STEAP1Q9UHE8 339 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 ZDHHC8Q9ULC8 765 aa14.19□□□□□ -0.14
SYNE3-203ENST00000554873 SCN3AQ9NY46 2000 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 HLA-AP01891 365 aaKnown RBP14.18□□□□□ -0.14
SYNE3-203ENST00000554873 LINC00271P0C7V0 271 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 CLUP10909 449 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 FXYD6P3P58550 94 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 SSBP1Q04837 148 aaKnown RBP14.18□□□□□ -0.14
SYNE3-203ENST00000554873 ACTBL2Q562R1 376 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 SLC35D3Q5M8T2 416 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 NKAIN2Q5VXU1 208 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 ZNF574Q6ZN55 896 aaPredicted RBP14.18□□□□□ -0.14
SYNE3-203ENST00000554873 FRRS1Q6ZNA5 592 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 SECTM1Q8WVN6 248 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 DCUN1D4Q92564 292 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 BCO1Q9HAY6 547 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 DOK5Q9P104 306 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 KCNE5Q9UJ90 142 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 TBX21Q9UL17 535 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 ADAM18Q9Y3Q7 739 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 MEIS3P1A6NDR6 274 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 AGPAT2O15120 278 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 VAMP1P23763 118 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 LPAR6P43657 344 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 RAB28P51157 221 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 PLPP4Q5VZY2 271 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 GRASPQ7Z6J2 395 aaPredicted RBP14.18□□□□□ -0.14
SYNE3-203ENST00000554873 GABRG1Q8N1C3 465 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 OR2L5Q8NG80 312 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 ADAMTS15Q8TE58 950 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 DPH1Q9BZG8 443 aa14.18□□□□□ -0.14
SYNE3-203ENST00000554873 ARG1P05089 322 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 CEBPBP17676 345 aa14.17□□□□□ -0.14
SYNE3-203ENST00000554873 SULT1A1P50225 295 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms