RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 DPPA2Q7Z7J5 298 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SLC5A8Q8N695 610 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 OR4F5Q8NH21 305 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 FAM131CQ96AQ9 280 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 APH1AQ96BI3 265 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ITPKCQ96DU7 683 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 OR4F4Q96R69 305 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PCGF1Q9BSM1 259 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 KCNIP2Q9NS61 270 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 NLKQ9UBE8 527 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 FAM208BQ5VWN6 2430 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 NPC1O15118 1278 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 DEGS1O15121 323 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CXCL13O43927 109 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SNAP29O95721 258 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 FGF19O95750 216 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 RBM11P57052 281 aaKnown RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 FLI1Q01543 452 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 IZUMO4Q1ZYL8 232 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 AMMECR1LQ6DCA0 310 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CDKN2AIPNLQ96HQ2 116 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PRRC1Q96M27 445 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PCDHB16Q9NRJ7 776 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 BOKQ9UMX3 212 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TIMM9Q9Y5J7 89 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 DOT1LQ8TEK3 1739 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 A0A1W2PNV4 684 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 BTNL10A8MVZ5 291 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TRIM77I1YAP6 450 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 NEURL1O76050 574 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 RCBTB2O95199 551 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ERVFC1-1P60608 527 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PHYHD1Q5SRE7 291 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 DCAF12Q5T6F0 453 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 REEP3Q6NUK4 255 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MBOAT4Q96T53 435 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 LPAR5Q9H1C0 372 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TMED3Q9Y3Q3 217 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 FUOMA2VDF0 154 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 C3orf80F5H4A9 247 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 LRRC55Q6ZSA7 311 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 FTMTQ8N4E7 242 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 OR2Z1Q8NG97 314 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SRRQ9GZT4 340 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 GHRLQ9UBU3 117 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TET3O43151 1660 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 RGPD3A6NKT7 1758 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 RGPD4Q7Z3J3 1758 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 AGAP14A8MT82 685 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 INMT-MINDY4F8WBC2 141 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 FZD6O60353 706 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ABHD16AO95870 558 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CDK1P06493 297 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 KLRB1Q12918 225 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 VAMP3Q15836 100 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 HENMT1Q5T8I9 393 aaKnown RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PIP5KL1Q5T9C9 394 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PHF13Q86YI8 300 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PLD4Q96BZ4 506 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 NEU1Q99519 415 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 M0R135 149 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 PNPP00491 289 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 IDUAP35475 653 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 RPS21P63220 83 aaKnown RBP3.03□□□□□ -1.92
SYNE2-212ENST00000554584 GK2Q14410 553 aaPredicted RBP3.03□□□□□ -1.92
SYNE2-212ENST00000554584 BTNL3Q6UXE8 466 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 MOB1BQ7L9L4 216 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 WDSUB1Q8N9V3 476 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 MTMR14Q8NCE2 650 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF799Q96GE5 643 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 CCDC32Q9BV29 185 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 ATG4BQ9Y4P1 393 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 NME2P1O60361 137 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 DLX3O60479 287 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 TFF1P04155 84 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 CD200P41217 278 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 SH3BP2P78314 561 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 LHFPL4Q7Z7J7 247 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 CNTN4Q8IWV2 1026 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 ZDHHC23Q8IYP9 409 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 P2RX4Q99571 388 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 HSD17B10Q99714 261 aaKnown RBP3.03□□□□□ -1.92
SYNE2-212ENST00000554584 FBXL2Q9UKC9 423 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 TUBAL3A6NHL2 446 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 AQP12BA6NM10 295 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 TMEM63AO94886 807 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 FGF5P12034 268 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 CD6P30203 668 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 PTGIRP43119 386 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 CDKN2DP55273 166 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 DGCR2P98153 550 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 OR4D1Q15615 310 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 FBXO46Q6PJ61 603 aaPredicted RBP3.03□□□□□ -1.92
SYNE2-212ENST00000554584 OR4B1Q8NGF8 309 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 OR56A3Q8NH54 315 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 CCL17Q92583 94 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 SOSTQ9BQB4 213 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 YTHDF1Q9BYJ9 559 aaKnown RBP3.03□□□□□ -1.92
SYNE2-212ENST00000554584 PGPEP1Q9NXJ5 209 aa3.03□□□□□ -1.92
SYNE2-212ENST00000554584 RNF24Q9Y225 148 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms