RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 LOC100509620A0A075B734 347 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 MEIS3P1A6NDR6 274 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 ZNF727A8MUV8 499 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 H0YIV9 168 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 HMGN4O00479 90 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 B4GALT2O60909 372 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 DFFBO76075 338 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 PAPLNO95428 1278 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 GPANK1O95872 356 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 IL6RP08887 468 aaPredicted RBP8.66□□□□□ -1.02
SIX4-202ENST00000554079 OR4A8P0C604 315 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 ZNF735P0CB33 412 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 IL9P15248 144 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 SELEP16581 610 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 RAB6AP20340 208 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 GALNSP34059 522 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 GPR4P46093 362 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 HMGCS2P54868 508 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 SNRPNP63162 240 aaKnown RBP8.66□□□□□ -1.02
SIX4-202ENST00000554079 SP3Q02447 781 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 RASGEF1BQ0VAM2 473 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 GXYLT1Q4G148 440 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 PRPF38BQ5VTL8 546 aaKnown RBP8.66□□□□□ -1.02
SIX4-202ENST00000554079 TMEM268Q5VZI3 342 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 TMEM183AQ8IXX5 376 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 ZNF433Q8N7K0 673 aaPredicted RBP8.66□□□□□ -1.02
SIX4-202ENST00000554079 AMER3Q8N944 861 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 SEMA6DQ8NFY4 1073 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 SFXN5Q8TD22 340 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 MITD1Q8WV92 249 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 COL26A1Q96A83 441 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 EID2BQ96D98 161 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 PELI1Q96FA3 418 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 GNRHR2Q96P88 292 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 AQP10Q96PS8 301 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 G6PC3Q9BUM1 346 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 MENTQ9BUN1 341 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 SLC12A9Q9BXP2 914 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 TMEM39BQ9GZU3 492 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 SLC5A7Q9GZV3 580 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 OR2S2Q9NQN1 319 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 IL36AQ9UHA7 158 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 V9GYS6 101 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 THSD7BQ9C0I4 1608 aa8.66□□□□□ -1.02
SIX4-202ENST00000554079 CHD3Q12873 2000 aaKnown RBP8.65□□□□□ -1.02
SIX4-202ENST00000554079 A0A087WWC5 75 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 TGIF2-C20orf24A0A0A6YYL0 155 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 ZNF705GA8MUZ8 300 aaPredicted RBP8.65□□□□□ -1.02
SIX4-202ENST00000554079 H7C4K7 107 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 INSIG1O15503 277 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 RAMP1O60894 148 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 WNT11O96014 354 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 RPLP2P05387 115 aaKnown RBP8.65□□□□□ -1.02
SIX4-202ENST00000554079 OR5AC1P0C628 307 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 ZGLP1P0C6A0 271 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 EDNRBP24530 442 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 AKT2P31751 481 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 CEACAM8P31997 349 aaPredicted RBP8.65□□□□□ -1.02
SIX4-202ENST00000554079 BRS3P32247 399 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 SSBP1Q04837 148 aaKnown RBP8.65□□□□□ -1.02
SIX4-202ENST00000554079 ARHGAP19Q14CB8 494 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 TP53I3Q53FA7 332 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 SLC22A25Q6T423 547 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 SLC39A5Q6ZMH5 540 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 OR52N4Q8NGI2 321 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 SCAMP5Q8TAC9 235 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 CDC6Q99741 560 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 POTEKPQ9BYX7 375 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 OR2AG1Q9H205 316 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 DNAJC4Q9NNZ3 241 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 MYNNQ9NPC7 610 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 KLK14Q9P0G3 267 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 MYOTQ9UBF9 498 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 TRPC4Q9UBN4 977 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 PITPNC1Q9UKF7 332 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 SCML2Q9UQR0 700 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 VSIG4Q9Y279 399 aa8.65□□□□□ -1.02
SIX4-202ENST00000554079 A0A0G2JN53 185 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 A6NCN8 305 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 SLC22A31A6NKX4 558 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 ANKRD66B4E2M5 251 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 EEF1E1-BLOC1S5C9J1V9 151 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 K7EP13 123 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 DCNP07585 359 aaKnown RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 GALTP07902 379 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 ELFN1P0C7U0 828 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 LIPCP11150 499 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 IRF2P14316 349 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 KCNE1P15382 129 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 PNLIPP16233 465 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 SLC2A5P22732 501 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 LMO1P25800 156 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 HOXD9P28356 352 aaPredicted RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 TSFMP43897 325 aaKnown RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 RABIFP47224 123 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 AFF3P51826 1226 aaKnown RBP8.64□□□□□ -1.03
SIX4-202ENST00000554079 SLC37A1P57057 533 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 TAS2R38P59533 333 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 LTBQ06643 244 aa8.64□□□□□ -1.03
SIX4-202ENST00000554079 PPP1R1AQ13522 171 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms