RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 PRSS50Q9UI38 385 aa12.78□□□□□ -0.36
SHMT2-210ENST00000553950 EXOGQ9Y2C4 368 aaKnown RBP12.78□□□□□ -0.36
SHMT2-210ENST00000553950 EXOSC1Q9Y3B2 195 aaKnown RBP12.78□□□□□ -0.36
SHMT2-210ENST00000553950 UGT2A1Q9Y4X1 527 aa12.78□□□□□ -0.36
SHMT2-210ENST00000553950 SNX5Q9Y5X3 404 aa12.78□□□□□ -0.36
SHMT2-210ENST00000553950 KMT2BQ9UMN6 2715 aaPredicted RBP12.77□□□□□ -0.36
SHMT2-210ENST00000553950 C12orf71A8MTZ7 269 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 EEF1E1-BLOC1S5C9J1V9 151 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 ZNF670-ZNF695F2Z2N8 137 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 EEF1E1O43324 174 aaKnown RBP12.77□□□□□ -0.37
SHMT2-210ENST00000553950 XPNPEP2O43895 674 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 CGAP01215 116 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 IGHV3-9P01782 118 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 OR8G3PP0DMU2 310 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 HOXB1P14653 301 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-210ENST00000553950 BMP5P22003 454 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 ACTA2P62736 377 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 ACTG2P63267 376 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 PHYHD1Q5SRE7 291 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 OR7E24Q6IFN5 339 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 ANKRD16Q6P6B7 361 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 ZNF813Q6ZN06 617 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 PRSS48Q7RTY5 328 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 SYT9Q86SS6 491 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 EGFL6Q8IUX8 553 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 TIGD4Q8IY51 512 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 ACBD7Q8N6N7 88 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 OR51L1Q8NGJ5 315 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 HAVCR2Q8TDQ0 301 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 ASB17Q8WXJ9 295 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 LGALS12Q96DT0 336 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 TMEM80Q96HE8 168 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 CDADC1Q9BWV3 514 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 DUSP21Q9H596 190 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 GALNT8Q9NY28 637 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 ELOVL5Q9NYP7 299 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 AASSQ9UDR5 926 aa12.77□□□□□ -0.37
SHMT2-210ENST00000553950 DIMT1Q9UNQ2 313 aaKnown RBP12.77□□□□□ -0.37
SHMT2-210ENST00000553950 MYO7BQ6PIF6 2116 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 IGKV1D-43A0A0B4J1Z2 117 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 MAGEA13PA6NCF6 341 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 IGHA1P01876 353 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 CDK1P06493 297 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 CST2P09228 141 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 SCRN3Q0VDG4 424 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 ST3GAL4Q11206 333 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 SLC36A2Q495M3 483 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 FAM27BQ5VT28 67 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 RNLSQ5VYX0 342 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 SLC18B1Q6NT16 456 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 KLHL24Q6TFL4 600 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.76□□□□□ -0.37
SHMT2-210ENST00000553950 FJX1Q86VR8 437 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 SLC35F2Q8IXU6 374 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 GABRG1Q8N1C3 465 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 OR2AJ1Q8NGZ0 328 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 C11orf40Q8WZ69 217 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 BOD1Q96IK1 185 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 HDHD5Q9BXW7 423 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 AMBNQ9NP70 447 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 OBP2BQ9NPH6 170 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 LAMP5Q9UJQ1 280 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 FBXL3Q9UKT7 428 aa12.76□□□□□ -0.37
SHMT2-210ENST00000553950 A0A087WXM4 84 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 CIB4A0PJX0 185 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 TRIM64A6NGJ6 449 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 FAM171A2A8MVW0 826 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 PTGES3LE9PB15 166 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 MYL12BO14950 172 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 SELENOFO60613 162 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 UBL3O95164 117 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 ITGA5P08648 1049 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 MRPL3P09001 348 aaKnown RBP12.75□□□□□ -0.37
SHMT2-210ENST00000553950 SPARCP09486 303 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 B4GALT1P15291 398 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 AGAP20933 346 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 GNLYP22749 145 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 IL32P24001 234 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 NAA10P41227 235 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-210ENST00000553950 ASCL1P50553 236 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 MVKQ03426 396 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 ETFDHQ16134 617 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 SGCAQ16586 387 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 PCK2Q16822 640 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 SOWAHCQ53LP3 525 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-210ENST00000553950 KCTD18Q6PI47 426 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-210ENST00000553950 ZNF773Q6PK81 442 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 RHOUQ7L0Q8 258 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 LINGO2Q7L985 606 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 FAM220AQ7Z4H9 259 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 SLC22A24Q8N4F4 322 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 ZNF511Q8NB15 262 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 OR10H4Q8NGA5 316 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 OR52I1Q8NGK6 324 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 OR1K1Q8NGR3 316 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 OTOSQ8NHW6 89 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 PRR7Q8TB68 274 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 FCGR1BQ92637 280 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 GGHQ92820 318 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 NABP1Q96AH0 204 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms