RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 MFGE8Q08431 387 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 PLXDC2Q6UX71 529 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 FAM131AQ6UXB0 335 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 OR14L1PQ8NHC6 308 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 CLEC4AQ9UMR7 237 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 SLC22A13Q9Y226 551 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 RASD1Q9Y272 281 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 SPTBN2O15020 2390 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 GVINP1Q7Z2Y8 2422 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 POM121CA8CG34 1229 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 SPNP16150 400 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 ZNF12P17014 697 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 GALP22466 123 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 MYL9P24844 172 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 CRABP1P29762 137 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 THBS2P35442 1172 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 KIR3DL2P43630 455 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 MAP2K6P52564 334 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 ALKBH1Q13686 389 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 P2RY14Q15391 338 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 C21orf62-AS1Q17RA5 79 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 TRIM16LQ309B1 348 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 C6orf183Q5T699 404 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 DDI2Q5TDH0 399 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 GLRX5Q86SX6 157 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 OR8H2Q8N162 312 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 MS4A15Q8N5U1 240 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 RPS4Y2Q8TD47 263 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 ADAMTS14Q8WXS8 1223 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 SNX18Q96RF0 628 aa11.36□□□□□ -0.59
VIPAS39-206ENST00000553888 A0A087WZY1 265 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 A0A1W2PPL8 197 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 AQP7P3A6NL99 342 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 TNFRSF10AO00220 468 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 NEURL1O76050 574 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 CELA3AP09093 270 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 PTGS2P35354 604 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 FAPQ12884 760 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 OXA1LQ15070 435 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 CCDC58Q4VC31 144 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 WDR38Q5JTN6 314 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 SFXN4Q6P4A7 337 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 TUBA3EQ6PEY2 450 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 CNIH2Q6PI25 160 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 ZNF600Q6ZNG1 722 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 DCXRQ7Z4W1 244 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 RAB43Q86YS6 212 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 OR2G2Q8NGZ5 317 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 SLC25A43Q8WUT9 341 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 OR8B4Q96RC9 309 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 GFI1Q99684 422 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 MRPL13Q9BYD1 178 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 MROQ9BYG7 248 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 EMC7Q9NPA0 242 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 ZNF281Q9Y2X9 895 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 HDGFL3Q9Y3E1 203 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 CUL9Q8IWT3 2517 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 PFDN1O60925 122 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 WDPCPO95876 746 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 PGA4P0DJD7 388 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 PGA3P0DJD8 388 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 GAAP10253 952 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 ZNF43P17038 809 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 CLDN17P56750 224 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 CLRN1P58418 232 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 MAJINQ3KP22 176 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 CEP78Q5JTW2 689 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 DND1Q8IYX4 353 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 POC5Q8NA72 575 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 OR5AK2Q8NH90 309 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 WDFY2Q96P53 400 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 ZNF385AQ96PM9 386 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 SRRQ9GZT4 340 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 EDARQ9UNE0 448 aa11.35□□□□□ -0.59
VIPAS39-206ENST00000553888 FABP12A6NFH5 140 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 TMCC2O75069 709 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 TACSTD2P09758 323 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 PRKAR1AP10644 381 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 GDF1P27539 372 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 APEX1P27695 318 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 SUCLG1P53597 346 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 SLC17A1Q14916 467 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 TRAM1Q15629 374 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 TAB1Q15750 504 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 PHYHD1Q5SRE7 291 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 METTL11BQ5VVY1 283 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 SLC18B1Q6NT16 456 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 OR5H6Q8NGV6 325 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 C11orf40Q8WZ69 217 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 AP3S1Q92572 193 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 MRPL48Q96GC5 212 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 COX4I2Q96KJ9 171 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 OXGR1Q96P68 337 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 NKX3-1Q99801 234 aaPredicted RBP11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 SEC61A2Q9H9S3 476 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 LRP12Q9Y561 859 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 PTPRZ1P23471 2315 aaPredicted RBP11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 OR4C45A6NMZ5 311 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 ZNF879B4DU55 563 aa11.34□□□□□ -0.59
VIPAS39-206ENST00000553888 FZD7O75084 574 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms