RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ZNF32P17041 273 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 ARHGDIAP52565 204 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 KPNB1Q14974 876 aaKnown RBP19.77■□□□□ 0.76
TDP1-206ENST00000553569 ATP6AP1Q15904 470 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 SLC36A3Q495N2 470 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 FAM27BQ5VT28 67 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 OTPQ5XKR4 325 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 KRT80Q6KB66 452 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 SHQ1Q6PI26 577 aaKnown RBP19.77■□□□□ 0.76
TDP1-206ENST00000553569 DNM1P34Q6PK57 102 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 UGT2A3Q6UWM9 527 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 ATG16L2Q8NAA4 619 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 IL17RDQ8NFM7 739 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 OR4F15Q8NGB8 312 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 OR4Q3Q8NH05 313 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 IGFBPL1Q8WX77 278 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 PERPQ96FX8 193 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 RPRD1BQ9NQG5 326 aaKnown RBP19.77■□□□□ 0.76
TDP1-206ENST00000553569 KIF17Q9P2E2 1029 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 DCTN6O00399 190 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 MGRN1O60291 552 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 GPANK1O95872 356 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 SERPINA5P05154 406 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 CST2P09228 141 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 FASP25445 335 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 CRABP1P29762 137 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 TTKP33981 857 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 HGFACQ04756 655 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 PLP2Q04941 152 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 COX10Q12887 443 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 ENDOGQ14249 297 aaKnown RBP19.76■□□□□ 0.75
TDP1-206ENST00000553569 PABPC1L2AQ5JQF8 200 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 AGAP6Q5VW22 663 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 ZNF544Q6NX49 715 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 CD300LDQ6UXZ3 194 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.76■□□□□ 0.75
TDP1-206ENST00000553569 AMIGO2Q86SJ2 522 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 GLB1L2Q8IW92 636 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 MUC15Q8N387 334 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 IQCF1Q8N6M8 205 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 OR2T33Q8NG76 320 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 DUS3LQ96G46 650 aaKnown RBP19.76■□□□□ 0.75
TDP1-206ENST00000553569 TRAF4Q9BUZ4 470 aaPredicted RBP19.76■□□□□ 0.75
TDP1-206ENST00000553569 ZNF416Q9BWM5 594 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 SRA1Q9HD15 236 aaKnown RBP19.76■□□□□ 0.75
TDP1-206ENST00000553569 CA10Q9NS85 328 aa19.76■□□□□ 0.75
TDP1-206ENST00000553569 IQCMA0A1B0GVH7 501 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 MPZL1O95297 269 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 FCGR1AP12314 374 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 ANXA8P13928 327 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 POU1F1P28069 291 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 CDKN1AP38936 164 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 SNTB2Q13425 540 aaKnown RBP19.75■□□□□ 0.75
TDP1-206ENST00000553569 TESK1Q15569 626 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 DTX2Q86UW9 622 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 LNX2Q8N448 690 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 CYB561A3Q8NBI2 242 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 SLC30A7Q8NEW0 376 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 OR5K1Q8NHB7 308 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 AKR7LQ8NHP1 331 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 PYDC1Q8WXC3 89 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 LRTOMTQ8WZ04 291 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 SNX18Q96RF0 628 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 REV1Q9UBZ9 1251 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 BAIAP2Q9UQB8 552 aa19.75■□□□□ 0.75
TDP1-206ENST00000553569 IGLV1-36A0A0B4J1U3 117 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 OR6C68A6NDL8 312 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 CD8AP01732 235 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 CCL2P13500 99 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 APEX1P27695 318 aaKnown RBP19.74■□□□□ 0.75
TDP1-206ENST00000553569 APOBEC3AP31941 199 aaPredicted RBP19.74■□□□□ 0.75
TDP1-206ENST00000553569 ACTR3P61158 418 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 PCBD1P61457 104 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 GALK2Q01415 458 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 DAG1Q14118 895 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 OR6V1Q8N148 313 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 NPEPL1Q8NDH3 523 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 NUP37Q8NFH4 326 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 NRBF2Q96F24 287 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 BDH2Q9BUT1 245 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 CXXC4Q9H2H0 198 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 CDH20Q9HBT6 801 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 CBLN4Q9NTU7 201 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 B9D1Q9UPM9 204 aa19.74■□□□□ 0.75
TDP1-206ENST00000553569 PRRC2AP48634 2157 aaKnown RBP19.74■□□□□ 0.75
TDP1-206ENST00000553569 C12orf71A8MTZ7 269 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 FAM171A2A8MVW0 826 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 PTHP01270 115 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 ZNF35P13682 527 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 APLNRP35414 380 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 PTH2RP49190 550 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 PSG4Q00888 419 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 TBC1D28Q2M2D7 210 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 PAQR4Q8N4S7 273 aaPredicted RBP19.73■□□□□ 0.75
TDP1-206ENST00000553569 SLC37A3Q8NCC5 494 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 C11orf40Q8WZ69 217 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 RAB3IPQ96QF0 476 aaPredicted RBP19.73■□□□□ 0.75
TDP1-206ENST00000553569 OR2H1Q9GZK4 316 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 RACGAP1Q9H0H5 632 aa19.73■□□□□ 0.75
TDP1-206ENST00000553569 WNT5BQ9H1J7 359 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms