RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 BBIP1A8MTZ0 92 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 SNX3O60493 162 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 DCTN3O75935 186 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 KRT33AO76009 404 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 RGS11O94810 467 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 OR2C1O95371 312 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF682O95780 498 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 NPPAP01160 153 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 IFNA14P01570 189 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 HOXB5P09067 269 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 POU2F1P14859 743 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 ETS2P15036 469 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 NCK1P16333 377 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF17P17021 662 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 TCN1P20061 433 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 GTF2E2P29084 291 aaKnown RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 CEACAM8P31997 349 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 SLC1A3P43003 542 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 MAGEA8P43361 318 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 RPS5P46782 204 aaKnown RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 YAP1P46937 504 aaKnown RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 MRPL19P49406 292 aaKnown RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 ASCL1P50553 236 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 PSME3P61289 254 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 CSNK2A1P68400 391 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 SLC35A1P78382 337 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 LIPEQ05469 1076 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 EPS8Q12929 822 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 SELENBP1Q13228 472 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 CEACAM7Q14002 265 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 OR1Q1Q15612 314 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 OR7A5Q15622 319 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 MAPK11Q15759 364 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 ZSWIM7Q19AV6 140 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 TRMT5Q32P41 509 aaKnown RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 SLC25A35Q3KQZ1 300 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 ODF3L2Q3SX64 289 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 LRRC23Q53EV4 343 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 CXorf66Q5JRM2 361 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 GKAP1Q5VSY0 366 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 WBP2NLQ6ICG8 309 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 GRINAQ7Z429 371 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 PATL1Q86TB9 770 aaKnown RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 RANBP3LQ86VV4 465 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 SLC30A8Q8IWU4 369 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 TUSC5Q8IXB3 177 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 RNF148Q8N7C7 305 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 CCDC197Q8NCU1 140 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 OR2T12Q8NG77 320 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 MPLKIPQ8TAP9 179 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 RNF138Q8WVD3 245 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 PROX1Q92786 737 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 FAM162AQ96A26 154 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF524Q96C55 264 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 NTNG2Q96CW9 530 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 NSL1Q96IY1 281 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 CMTM3Q96MX0 182 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 MCHR1Q99705 422 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 KCTD14Q9BQ13 255 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 CCDC106Q9BWC9 280 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 C1QTNF5Q9BXJ0 243 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 SRXN1Q9BYN0 137 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF385DQ9H6B1 395 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 MCCC2Q9HCC0 563 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 BCL2L10Q9HD36 194 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 DECR2Q9NUI1 292 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 PAQR5Q9NXK6 330 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 TMEM181Q9P2C4 612 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF629Q9UEG4 869 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 CHRNA9Q9UGM1 479 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 OSGIN1Q9UJX0 560 aa4.13□□□□□ -1.75
ATXN3-220ENST00000553491 KLF2Q9Y5W3 355 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-220ENST00000553491 CRYBG3Q68DQ2 2970 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 CENPEQ02224 2701 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 COL12A1Q99715 3063 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 A0A1W2PNV4 684 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 hCG_1807616A0A1W2PRN6 198 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 CIB4A0PJX0 185 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 ELOVL7A1L3X0 281 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 FAM90A8PA6NJQ4 464 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 A8MVM7 634 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 CXCR6O00574 342 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 KPNA4O00629 521 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 NDUFAB1O14561 156 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 ADAMDEC1O15204 470 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 SLC22A2O15244 555 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 KCNAB3O43448 404 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 SERPINI2O75830 405 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 MFN2O95140 757 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 AKR7A3O95154 331 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 OR6A2O95222 327 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 AHSA1O95433 338 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 IGHV3-9P01782 118 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 HIST1H2ABP04908 130 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 IGKV2-30P06310 120 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 GPIP06744 558 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 YES1P07947 543 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 GUSBP08236 651 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 FAM90A13PP0C7W8 464 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 FAM90A24PP0C7X0 464 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms