RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 IGLV11-55A0A075B6I3 123 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 EIF4E2O60573 245 aaKnown RBP3.27□□□□□ -1.89
SYNE2-210ENST00000553455 CALM1P0DP23 149 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 CALM2P0DP24 149 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 CALM3P0DP25 149 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 ANXA8P13928 327 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 GPX4P36969 197 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-210ENST00000553455 TWF1Q12792 350 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 ILKQ13418 452 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 ZNF726P1Q15940 193 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 POU2AF1Q16633 256 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 ZSCAN26Q16670 478 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 HSDL1Q3SXM5 330 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 ANXA8L1Q5VT79 327 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 LUZP2Q86TE4 346 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 CMTM1Q8IZ96 169 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 OR10J6PQ8NGY7 276 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 CAPSLQ8WWF8 208 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 BPIFA3Q9BQP9 254 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 LINC00597Q9H2U6 94 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 MTCH1Q9NZJ7 389 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 LGALS13Q9UHV8 139 aa3.27□□□□□ -1.89
SYNE2-210ENST00000553455 TMX2-CTNND1H3BSU7 103 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 WRBO00258 174 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 PLEKP08567 350 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-210ENST00000553455 OR8G3PP0DMU2 310 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 STOMP27105 288 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 GTF2E2P29084 291 aaKnown RBP3.26□□□□□ -1.89
SYNE2-210ENST00000553455 CX3CR1P49238 355 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 RAB9AP51151 201 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 ZNF138P52744 262 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 CAPRIN1Q14444 709 aaKnown RBP3.26□□□□□ -1.89
SYNE2-210ENST00000553455 AGBL2Q5U5Z8 902 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 ENTHD1Q8IYW4 607 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 ZNF786Q8N393 782 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 PQLC3Q8N755 202 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 ZFP41Q8N8Y5 198 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 Q8N976 141 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 Q8N9L7 120 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 ZFP90Q8TF47 636 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 ZNF414Q96IQ9 312 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 CEP170P1Q96L14 293 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 CHAC1Q9BUX1 264 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 AUNIPQ9H7T9 357 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 LYARQ9NX58 379 aaKnown RBP3.26□□□□□ -1.89
SYNE2-210ENST00000553455 RABL2AQ9UBK7 228 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-210ENST00000553455 SLC17A4Q9Y2C5 497 aa3.26□□□□□ -1.89
SYNE2-210ENST00000553455 MN1Q10571 1320 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-210ENST00000553455 SCAMP2O15127 329 aaKnown RBP3.25□□□□□ -1.89
SYNE2-210ENST00000553455 HUS1O60921 280 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 ICOSLGO75144 302 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 SERPINE2P07093 398 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 ASGR1P07306 291 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 ERCC1P07992 297 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-210ENST00000553455 MYL2P10916 166 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 BCKDHBP21953 392 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 UBE2AP49459 152 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 RND2P52198 227 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 PRPSAP1Q14558 356 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 CCNJQ5T5M9 372 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 TSPO2Q5TGU0 170 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 TMEM53Q6P2H8 277 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 CLEC2AQ6UVW9 174 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 Q6ZVH6 145 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 NCCRP1Q6ZVX7 275 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-210ENST00000553455 ABHD13Q7L211 337 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 EIF3MQ7L2H7 374 aaKnown RBP3.25□□□□□ -1.89
SYNE2-210ENST00000553455 HDDC2Q7Z4H3 204 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 OAFQ86UD1 273 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 PCP2Q8IVA1 136 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 GABRG1Q8N1C3 465 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 OR2A1Q8NGT9 310 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 NUBPLQ8TB37 319 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 ZNF596Q8TC21 504 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 STARD8Q92502 1023 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 C8orf44Q96CB5 159 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 PRRC1Q96M27 445 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 LINC00167Q96N53 147 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 COL21A1Q96P44 957 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 MTG1Q9BT17 334 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-210ENST00000553455 TPK1Q9H3S4 243 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 SLC40A1Q9NP59 571 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 SAMSN1Q9NSI8 373 aaKnown RBP3.25□□□□□ -1.89
SYNE2-210ENST00000553455 CARMIL3Q8ND23 1372 aa3.25□□□□□ -1.89
SYNE2-210ENST00000553455 PHLPP2Q6ZVD8 1323 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 MAPK8IP3Q9UPT6 1336 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 TEX46H3BTG2 121 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 NUPL2O15504 423 aaKnown RBP3.24□□□□□ -1.89
SYNE2-210ENST00000553455 CLDN11O75508 207 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 RAB3DO95716 219 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 FABP3P05413 133 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 HOXC4P09017 264 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-210ENST00000553455 TLX1NBP0CAT3 122 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 CDKN2BP42772 138 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 UQCRFS1P47985 274 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 MRPL19P49406 292 aaKnown RBP3.24□□□□□ -1.89
SYNE2-210ENST00000553455 CYB561P49447 251 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 CSNK1EP49674 416 aaKnown RBP3.24□□□□□ -1.89
SYNE2-210ENST00000553455 UCNP55089 124 aa3.24□□□□□ -1.89
SYNE2-210ENST00000553455 SF3A2Q15428 464 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms