RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 CADM1Q9BY67 442 aaKnown RBP10.16□□□□□ -0.78
CKAP4-202ENST00000552828 PLA2G12AQ9BZM1 189 aa10.16□□□□□ -0.78
CKAP4-202ENST00000552828 MAGIXQ9H6Y5 334 aa10.16□□□□□ -0.78
CKAP4-202ENST00000552828 METTL17Q9H7H0 456 aaPredicted RBP10.16□□□□□ -0.78
CKAP4-202ENST00000552828 HIF1ANQ9NWT6 349 aa10.16□□□□□ -0.78
CKAP4-202ENST00000552828 TAS2R5Q9NYW4 299 aa10.16□□□□□ -0.78
CKAP4-202ENST00000552828 FBXL3Q9UKT7 428 aa10.16□□□□□ -0.78
CKAP4-202ENST00000552828 PKD1L1Q8TDX9 2849 aa10.16□□□□□ -0.78
CKAP4-202ENST00000552828 TRBV4-1A0A0J9YWV2 114 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 AQP12BA6NM10 295 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 EFCAB9A8MZ26 197 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 FAM157AC9JC47 383 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 SERPINI2O75830 405 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 KRT36O76013 467 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 GADD45GO95257 159 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 ATP6V1G2O95670 118 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 MSMBP08118 114 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 SAGP10523 405 aaPredicted RBP10.15□□□□□ -0.78
CKAP4-202ENST00000552828 CD79AP11912 226 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 LMO4P61968 165 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 RPS23P62266 143 aaKnown RBP10.15□□□□□ -0.78
CKAP4-202ENST00000552828 SPIBQ01892 262 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 PIGFQ07326 219 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 FLOT2Q14254 428 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 USP43Q70EL4 1123 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 LRP11Q86VZ4 500 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 WDFY1Q8IWB7 410 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 AQP12AQ8IXF9 295 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 TXNDC15Q96J42 360 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 EMC6Q9BV81 110 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 MMADHCQ9H3L0 296 aaPredicted RBP10.15□□□□□ -0.78
CKAP4-202ENST00000552828 OCEL1Q9H607 264 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 KRCC1Q9NPI7 259 aaPredicted RBP10.15□□□□□ -0.78
CKAP4-202ENST00000552828 B3GAT2Q9NPZ5 323 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 TMEM5Q9Y2B1 443 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 POFUT2Q9Y2G5 429 aa10.15□□□□□ -0.78
CKAP4-202ENST00000552828 A0A1W2PRG6 482 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 WNT9BO14905 357 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 RP2O75695 350 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 GAAP10253 952 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 B4GALT1P15291 398 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 HOXB6P17509 224 aaKnown RBP10.14□□□□□ -0.79
CKAP4-202ENST00000552828 MAKP20794 623 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 RRM2P31350 389 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 AQP2P41181 271 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 ALDH3B1P43353 468 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 MAGEA2P43356 314 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 GIPRP48546 466 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 SLC9A3P48764 834 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 RAB1AP62820 205 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 RPL18Q07020 188 aaKnown RBP10.14□□□□□ -0.79
CKAP4-202ENST00000552828 ANKDD1AQ495B1 522 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 CARD17Q5XLA6 110 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 TMPRSS11FQ6ZWK6 438 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 SLC35D2Q76EJ3 337 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 OAFQ86UD1 273 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 ZNF584Q8IVC4 421 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 OR4K5Q8NGD3 323 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 OR51F2Q8NH61 342 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 FAM216AQ8WUB2 273 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 YIPF5Q969M3 257 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 RAB3IPQ96QF0 476 aaPredicted RBP10.14□□□□□ -0.79
CKAP4-202ENST00000552828 SYT3Q9BQG1 590 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 LRMDAQ9H2I8 198 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 YY1AP1Q9H869 796 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 INIPQ9NRY2 104 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 ZNF275Q9NSD4 429 aaPredicted RBP10.14□□□□□ -0.79
CKAP4-202ENST00000552828 MED29Q9NX70 200 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 MYEF2Q9P2K5 600 aaKnown RBP10.14□□□□□ -0.79
CKAP4-202ENST00000552828 SLC7A8Q9UHI5 535 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 ZNF346Q9UL40 294 aaKnown RBP10.14□□□□□ -0.79
CKAP4-202ENST00000552828 TMCC3Q9ULS5 477 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 POMPQ9Y244 141 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 GRIP1Q9Y3R0 1128 aa10.14□□□□□ -0.79
CKAP4-202ENST00000552828 TRAV20A0A0B4J274 112 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 DHRS12A0PJE2 317 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 TMEM89A2RUT3 159 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 SPRY1O43609 319 aaPredicted RBP10.13□□□□□ -0.79
CKAP4-202ENST00000552828 NCR1O76036 304 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 UBL3O95164 117 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 RAB36O95755 333 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 BCL10O95999 233 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 SERPINA5P05154 406 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 F13BP05160 661 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 TSPAN19P0C672 248 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 RAP2AP10114 183 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 IFNGR2P38484 337 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 GPR4P46093 362 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 PTDSS1P48651 473 aaKnown RBP10.13□□□□□ -0.79
CKAP4-202ENST00000552828 BIDP55957 195 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 HILS1P60008 231 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 GALK2Q01415 458 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 CAMK2DQ13557 499 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 LAPTM4AQ15012 233 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 MAD2L1BPQ15013 274 aaPredicted RBP10.13□□□□□ -0.79
CKAP4-202ENST00000552828 SEC23BQ15437 767 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 TAF11Q15544 211 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 ALG10Q5BKT4 473 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 SPATA24Q86W54 205 aa10.13□□□□□ -0.79
CKAP4-202ENST00000552828 TEX29Q8N6K0 151 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms