RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 HIST2H3AQ71DI3 136 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 ASCL5Q7RTU5 278 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 DPY19L4Q7Z388 723 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 WDFY1Q8IWB7 410 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 TMEM123Q8N131 208 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 OR6K6Q8NGW6 343 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 RNF133Q8WVZ7 376 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 AP3S1Q92572 193 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 TMEM45BQ96B21 275 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 PSMG3-AS1Q96PY0 264 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 MRI1Q9BV20 369 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 HDHD5Q9BXW7 423 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 NIPAL2Q9H841 368 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 GP6Q9HCN6 339 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 LAMP5Q9UJQ1 280 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 DKKL1Q9UK85 242 aa8.73□□□□□ -1.01
TMEM116-216ENST00000552800 COA3Q9Y2R0 106 aaPredicted RBP8.73□□□□□ -1.01
TMEM116-216ENST00000552800 A0A0G2JMM0 328 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 A0A1W2PPB8 328 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 A0A1W2PRS3 328 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 ISPDA4D126 451 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 ACOD1A6NK06 481 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 TMEM212A6NML5 194 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 KIR3DP1A8MWS1 328 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 TMCC2O75069 709 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 ARL6IP5O75915 188 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 ZFPL1O95159 310 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 CDRT1O95170 752 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 KRT8P05787 483 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 MRPL3P09001 348 aaKnown RBP8.72□□□□□ -1.01
TMEM116-216ENST00000552800 CPN1P15169 458 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 GDI2P50395 445 aaKnown RBP8.72□□□□□ -1.01
TMEM116-216ENST00000552800 LHX2P50458 406 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 BIDP55957 195 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 SCAND1P57086 179 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 CARD18P57730 90 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 NANOS3P60323 173 aaKnown RBP8.72□□□□□ -1.01
TMEM116-216ENST00000552800 RASGEF1BQ0VAM2 473 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 C19orf57Q0VDD7 668 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 ETFDHQ16134 617 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 ZMAT1Q5H9K5 638 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 CEP78Q5JTW2 689 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 PDSS1Q5T2R2 415 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 Q6ZSR3 168 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 C20orf196Q8IYI0 205 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 KDM8Q8N371 416 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 RFLNBQ8N5W9 214 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 NOXO1Q8NFA2 376 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 OR2G2Q8NGZ5 317 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 OR2V1Q8NHB1 315 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 NEIL3Q8TAT5 605 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 ITFG2Q969R8 447 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 MCHR2Q969V1 340 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 CPNE4Q96A23 557 aaPredicted RBP8.72□□□□□ -1.01
TMEM116-216ENST00000552800 DCLRE1CQ96SD1 692 aaKnown RBP8.72□□□□□ -1.01
TMEM116-216ENST00000552800 SMAD5Q99717 465 aaKnown RBP8.72□□□□□ -1.01
TMEM116-216ENST00000552800 ABHD6Q9BV23 337 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 PPIL3Q9H2H8 161 aaKnown RBP8.72□□□□□ -1.01
TMEM116-216ENST00000552800 ZDHHC11Q9H8X9 412 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 TIGARQ9NQ88 270 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 GALNT8Q9NY28 637 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 GLTPQ9NZD2 209 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 FRRS1LQ9P0K9 344 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 B4GALT7Q9UBV7 327 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 WASF3Q9UPY6 502 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 KLHDC2Q9Y2U9 406 aa8.72□□□□□ -1.01
TMEM116-216ENST00000552800 GVINP1Q7Z2Y8 2422 aa8.71□□□□□ -1.01
TMEM116-216ENST00000552800 TRBV5-7A0A0A0MS05 114 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 IGKV1D-43A0A0B4J1Z2 117 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 A0A0G2JK05 382 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 TRBV2A0A0J9YWF9 115 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 A0A1B0GVC2 190 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 OR6C65A6NJZ3 312 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 ZNF726A6NNF4 738 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 ZNF891A8MT65 544 aaPredicted RBP8.71□□□□□ -1.02
TMEM116-216ENST00000552800 ZNF879B4DU55 563 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 LOC110117498-PIK3R3F6TDL0 507 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 RPL36A-HNRNPH2H7BZ11 118 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 GPR171O14626 319 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 SMAD9O15198 467 aaKnown RBP8.71□□□□□ -1.02
TMEM116-216ENST00000552800 ICMTO60725 284 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 RAMP1O60894 148 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 IGHG3P01860 377 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 CD8BP10966 210 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 ZNF708P17019 499 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 ENPP1P22413 925 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 ITGA3P26006 1051 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 TNFSF8P32971 234 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 S100A5P33763 92 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 NAA10P41227 235 aaPredicted RBP8.71□□□□□ -1.02
TMEM116-216ENST00000552800 EIF1AXP47813 144 aaKnown RBP8.71□□□□□ -1.02
TMEM116-216ENST00000552800 TNFSF10P50591 281 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 NOVA1P51513 510 aaKnown RBP8.71□□□□□ -1.02
TMEM116-216ENST00000552800 PSMD7P51665 324 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 CLDN18P56856 261 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 OC90Q02509 493 aaPredicted RBP8.71□□□□□ -1.02
TMEM116-216ENST00000552800 TGIF1Q15583 401 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 TP53I3Q53FA7 332 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 RAET1LQ5VY80 246 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 HBMQ6B0K9 141 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms