RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 CTLA4P16410 223 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 APLNRP35414 380 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 CENPAP49450 140 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 ARHGDIAP52565 204 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 TBC1D28Q2M2D7 210 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 KRT80Q6KB66 452 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 FOXL2NBQ6ZUU3 175 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 PTCHD4Q6ZW05 846 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 PAPD5Q8NDF8 572 aaKnown RBP16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 OR1J2Q8NGS2 313 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 OR4K13Q8NH42 304 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 FBXO17Q96EF6 278 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 ZNF75AQ96N20 296 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 CACNG6Q9BXT2 260 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 ZNF556Q9HAH1 456 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 POLE4Q9NR33 117 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 PDP1Q9P0J1 537 aaPredicted RBP16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 POLR1DQ9Y2S0 133 aa16.01■□□□□ 0.15
PRPF40B-216ENST00000552301 F8P00451 2351 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 C12orf71A8MTZ7 269 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 SOX14O95416 240 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 PAX1P15863 534 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 HIST1H1CP16403 213 aaKnown RBP16■□□□□ 0.15
PRPF40B-216ENST00000552301 ZNF32P17041 273 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 SERPINF1P36955 418 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 CDKN2AP42771 156 aaKnown RBP16■□□□□ 0.15
PRPF40B-216ENST00000552301 RPS23P62266 143 aaKnown RBP16■□□□□ 0.15
PRPF40B-216ENST00000552301 SNRPD2P62316 118 aaKnown RBP16■□□□□ 0.15
PRPF40B-216ENST00000552301 HGFACQ04756 655 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 ETFDHQ16134 617 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 PABPC1L2AQ5JQF8 200 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 SLC35F1Q5T1Q4 408 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 GLB1L2Q8IW92 636 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 ALDH16A1Q8IZ83 802 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 TEX47Q8TBZ9 253 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 SNX18Q96RF0 628 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 NMNAT3Q96T66 252 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 FEVQ99581 238 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 TSSK6Q9BXA6 273 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 ZNF442Q9H7R0 627 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 IL20Q9NYY1 176 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 BAIAP2Q9UQB8 552 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 PMF1-BGLAPU3KQ54 211 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 OTOGQ6ZRI0 2925 aa16■□□□□ 0.15
PRPF40B-216ENST00000552301 OVOL3O00110 214 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 TIPRLO75663 272 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 CD8AP01732 235 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 MMP7P09237 267 aaPredicted RBP15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 OR4A8P0C604 315 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 NR4A1P22736 598 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 ADAM8P78325 824 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 COX10Q12887 443 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 YTHDF3Q7Z739 585 aaKnown RBP15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 TGIF2LYQ8IUE0 185 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 ZNF584Q8IVC4 421 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 SDR9C7Q8NEX9 313 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 OR2T33Q8NG76 320 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 OR52E2Q8NGJ4 325 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 SLCO4A1Q96BD0 722 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 FOXN4Q96NZ1 517 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 ZNF416Q9BWM5 594 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 PLA2G12AQ9BZM1 189 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 NUAK2Q9H093 628 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 EMC7Q9NPA0 242 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 RPRD1BQ9NQG5 326 aaKnown RBP15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 COA3Q9Y2R0 106 aaPredicted RBP15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 TIMM10BQ9Y5J6 103 aa15.99■□□□□ 0.15
PRPF40B-216ENST00000552301 B9A039 149 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 H3BN98 237 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 ZNF35P13682 527 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 THBS4P35443 961 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 SCRN3Q0VDG4 424 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 ADIPOQQ15848 244 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 C11orf71Q6IPW1 123 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 PRSS57Q6UWY2 283 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 ASRGL1Q7L266 308 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 ATG16L2Q8NAA4 619 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 WFDC11Q8NEX6 87 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 OR8D4Q8NGM9 314 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 AKR7LQ8NHP1 331 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 NIPSNAP1Q9BPW8 284 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 WACQ9BTA9 647 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 OR2H1Q9GZK4 316 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 BARX1Q9HBU1 254 aaPredicted RBP15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 ARMC1Q9NVT9 282 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 KIF17Q9P2E2 1029 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 CMAHPQ9Y471 501 aa15.98■□□□□ 0.15
PRPF40B-216ENST00000552301 BHLHE40O14503 412 aa15.97■□□□□ 0.15
PRPF40B-216ENST00000552301 IFNGP01579 166 aa15.97■□□□□ 0.15
PRPF40B-216ENST00000552301 FCGR1AP12314 374 aa15.97■□□□□ 0.15
PRPF40B-216ENST00000552301 CCL2P13500 99 aa15.97■□□□□ 0.15
PRPF40B-216ENST00000552301 ANXA8P13928 327 aa15.97■□□□□ 0.15
PRPF40B-216ENST00000552301 CCNOP22674 350 aa15.97■□□□□ 0.15
PRPF40B-216ENST00000552301 APEX1P27695 318 aaKnown RBP15.97■□□□□ 0.15
PRPF40B-216ENST00000552301 GDI2P50395 445 aaKnown RBP15.97■□□□□ 0.15
PRPF40B-216ENST00000552301 GLO1Q04760 184 aa15.97■□□□□ 0.15
PRPF40B-216ENST00000552301 ENDOGQ14249 297 aaKnown RBP15.97■□□□□ 0.15
PRPF40B-216ENST00000552301 SLC36A3Q495N2 470 aa15.97■□□□□ 0.15
PRPF40B-216ENST00000552301 CD300LDQ6UXZ3 194 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms