RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 HIP1O00291 1037 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 HSD17B6O14756 317 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 CD1EP15812 388 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 IL12AP29459 219 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 SHMT2P34897 504 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 SSR1P43307 286 aaKnown RBP3.39□□□□□ -1.87
LIMA1-205ENST00000550592 KLK7P49862 253 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 APOC4P55056 127 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 CDH4P55283 916 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 GNB2P62879 340 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 CDK16Q00536 496 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 OGDHQ02218 1023 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 ZNF763Q0D2J5 394 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 DDX39BQ13838 428 aaKnown RBP3.39□□□□□ -1.87
LIMA1-205ENST00000550592 PON2Q15165 354 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 IL17AQ16552 155 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 MICBQ29980 383 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 KRT71Q3SY84 523 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 BCL7AQ4VC05 210 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 SAMD4BQ5PRF9 694 aaKnown RBP3.39□□□□□ -1.87
LIMA1-205ENST00000550592 IL34Q6ZMJ4 242 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 PGAP1Q75T13 922 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 PRSS41Q7RTY9 318 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 RALGPS2Q86X27 583 aaPredicted RBP3.39□□□□□ -1.87
LIMA1-205ENST00000550592 OR51S1Q8NGJ8 323 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 SETD7Q8WTS6 366 aaKnown RBP3.39□□□□□ -1.87
LIMA1-205ENST00000550592 SDR42E1Q8WUS8 393 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 UFD1Q92890 307 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 NUS1Q96E22 293 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 TAAR1Q96RJ0 339 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 MRPL45Q9BRJ2 306 aaKnown RBP3.39□□□□□ -1.87
LIMA1-205ENST00000550592 C20orf85Q9H1P6 137 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 NIPAL2Q9H841 368 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 THUMPD1Q9NXG2 353 aaKnown RBP3.39□□□□□ -1.87
LIMA1-205ENST00000550592 BFARQ9NZS9 450 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 ZNF639Q9UID6 485 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 EML5Q05BV3 1969 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 LAMA1P25391 3075 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 ABCB11O95342 1321 aa3.39□□□□□ -1.87
LIMA1-205ENST00000550592 A0A1B0GVL5 298 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 MYBPHLA2RUH7 354 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 PSMB11A5LHX3 300 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 A6NIZ1 184 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 LOC110117498-PIK3R3F6TDL0 507 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 SPECC1L-ADORA2AF8WAN1 911 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 FOXE1O00358 373 aaPredicted RBP3.38□□□□□ -1.87
LIMA1-205ENST00000550592 EMC8O43402 210 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 MX1P20591 662 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 ATP6V1B2P21281 511 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 KPNA2P52292 529 aaKnown RBP3.38□□□□□ -1.87
LIMA1-205ENST00000550592 RAP1BP61224 184 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 IGFBP7Q16270 282 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 C6orf226Q5I0X4 101 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 CLLU1OSQ5K130 101 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 PPM1LQ5SGD2 360 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 PHYHD1Q5SRE7 291 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 MARCH8Q5T0T0 291 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 CASC10Q5T4H9 136 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 LIN9Q5TKA1 542 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 OR2A2Q6IF42 318 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 RUFY3Q7L099 469 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 ECHDC2Q86YB7 292 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 CNPY4Q8N129 248 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 OR10G3Q8NGC4 313 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 OR1L4Q8NGR5 311 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 ING5Q8WYH8 240 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 N4BP2L2Q92802 583 aaPredicted RBP3.38□□□□□ -1.87
LIMA1-205ENST00000550592 IMMP1LQ96LU5 166 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 POLR2J2Q9GZM3 115 aaKnown RBP3.38□□□□□ -1.87
LIMA1-205ENST00000550592 POLR2J3Q9H1A7 115 aaKnown RBP3.38□□□□□ -1.87
LIMA1-205ENST00000550592 AIG1Q9NVV5 245 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 ADAM22Q9P0K1 906 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 TMCO1Q9UM00 188 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 GINS2Q9Y248 185 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 ASF1AQ9Y294 204 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 NPTNQ9Y639 398 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 CDH10Q9Y6N8 788 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 RP1L1Q8IWN7 2480 aaPredicted RBP3.38□□□□□ -1.87
LIMA1-205ENST00000550592 BAZ2BQ9UIF8 2168 aaKnown RBP3.38□□□□□ -1.87
LIMA1-205ENST00000550592 HIVEP3Q5T1R4 2406 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 ATMQ13315 3056 aa3.38□□□□□ -1.87
LIMA1-205ENST00000550592 CENPEQ02224 2701 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 MYH4Q9Y623 1939 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 IGKV6D-41A0A0C4DH26 115 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 A0A0U1RQS6 177 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 GOLGA8SH3BPF8 625 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 CCL16O15467 120 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 SUPT7LO94864 414 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 OXSR1O95747 527 aaPredicted RBP3.37□□□□□ -1.87
LIMA1-205ENST00000550592 IGLV1-47P01700 117 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 HPNP05981 417 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 KLK3P07288 261 aaPredicted RBP3.37□□□□□ -1.87
LIMA1-205ENST00000550592 DNAH10OSP0CZ25 163 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 HSPD1P10809 573 aaKnown RBP3.37□□□□□ -1.87
LIMA1-205ENST00000550592 BCKDHBP21953 392 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 COX7A1P24310 79 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 CXCR2P25025 360 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 CD1CP29017 333 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 HOXA9P31269 272 aa3.37□□□□□ -1.87
LIMA1-205ENST00000550592 SLC11A1P49279 550 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms