RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 EXOSC1Q9Y3B2 195 aaKnown RBP12.44□□□□□ -0.42
CACNB3-216ENST00000550391 UGT2A1Q9Y4X1 527 aa12.44□□□□□ -0.42
CACNB3-216ENST00000550391 PCNX1Q96RV3 2341 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 A0A1W2PPL8 197 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 ZNF587BE7ETH6 402 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 RPL36A-HNRNPH2H7BZ11 118 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 SELENOFO60613 162 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 TNFSF13O75888 250 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 GPANK1O95872 356 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 IGHA1P01876 353 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 TFP02787 698 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 MT-ND2P03891 347 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 HRGP04196 525 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 HTR1AP08908 422 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 MRPL3P09001 348 aaKnown RBP12.43□□□□□ -0.42
CACNB3-216ENST00000550391 OR2T7P0C7T2 308 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 GAAP10253 952 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 ZNF823P16415 610 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 MYL12AP19105 171 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 GRNP28799 593 aaKnown RBP12.43□□□□□ -0.42
CACNB3-216ENST00000550391 C21orf33P30042 268 aaPredicted RBP12.43□□□□□ -0.42
CACNB3-216ENST00000550391 NAA10P41227 235 aaPredicted RBP12.43□□□□□ -0.42
CACNB3-216ENST00000550391 ACTC1P68032 377 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 ACTA1P68133 377 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 TUBA4AP68366 448 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 ROR2Q01974 943 aaKnown RBP12.43□□□□□ -0.42
CACNB3-216ENST00000550391 MVKQ03426 396 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 KCNMB1Q16558 191 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 RNLSQ5VYX0 342 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 FBXW9Q5XUX1 488 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 TMEM211Q6ICI0 200 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 LYPD4Q6UWN0 246 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 TFAP2EQ6VUC0 442 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 FOXL2NBQ6ZUU3 175 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 SLC35F2Q8IXU6 374 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 SPARTQ8N0X7 666 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 UBE2J2Q8N2K1 259 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 SVOPQ8N4V2 548 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 ACBD7Q8N6N7 88 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 NAXEQ8NCW5 288 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 OR10H4Q8NGA5 316 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 OR2T27Q8NH04 317 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 C11orf40Q8WZ69 217 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 FOXN4Q96NZ1 517 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 ALKBH3Q96Q83 286 aaPredicted RBP12.43□□□□□ -0.42
CACNB3-216ENST00000550391 MNTQ99583 582 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 JAM3Q9BX67 310 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 CDCA4Q9BXL8 241 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 MRPS26Q9BYN8 205 aaKnown RBP12.43□□□□□ -0.42
CACNB3-216ENST00000550391 SEC61A2Q9H9S3 476 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 INPP5EQ9NRR6 644 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 MRPL22Q9NWU5 206 aaKnown RBP12.43□□□□□ -0.42
CACNB3-216ENST00000550391 CHCHD3Q9NX63 227 aaKnown RBP12.43□□□□□ -0.42
CACNB3-216ENST00000550391 PRSS50Q9UI38 385 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 SCOCQ9UIL1 159 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 COMMD3-BMI1R4GMX3 469 aa12.43□□□□□ -0.42
CACNB3-216ENST00000550391 FBN3Q75N90 2809 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 TRGV8A0A0C4DH27 118 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 DAPL1A0PJW8 107 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 A1L4Q6 167 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 TRIM64CA6NLI5 447 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 ZNF593O00488 134 aaPredicted RBP12.42□□□□□ -0.42
CACNB3-216ENST00000550391 MPZL1O95297 269 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 CNOT4O95628 575 aaKnown RBP12.42□□□□□ -0.42
CACNB3-216ENST00000550391 IGHV3-9P01782 118 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 ADRA2AP08913 450 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 SMIM18P0DKX4 95 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 ATP6V1B1P15313 513 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 NPR2P20594 1047 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 CTSSP25774 331 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 CDAP32320 146 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 CA7P43166 264 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 ENTPD1P49961 510 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 PMPCAQ10713 525 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 SGCAQ16586 387 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 CEACAM16Q2WEN9 425 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 TEX30Q5JUR7 227 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 VWA1Q6PCB0 445 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 OR10H5Q8NGA6 315 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 OR6N2Q8NGY6 317 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 STARD4Q96DR4 205 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 ZNF837Q96EG3 531 aaPredicted RBP12.42□□□□□ -0.42
CACNB3-216ENST00000550391 DMRTA2Q96SC8 542 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 SFXN3Q9BWM7 321 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 WDR76Q9H967 626 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 POLE4Q9NR33 117 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 PLSCR4Q9NRQ2 329 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 KCNG2Q9UJ96 466 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 SH3BGRL2Q9UJC5 107 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 FREM1Q5H8C1 2179 aa12.42□□□□□ -0.42
CACNB3-216ENST00000550391 HSPB2A8KAH6 182 aa12.41□□□□□ -0.42
CACNB3-216ENST00000550391 C12orf71A8MTZ7 269 aa12.41□□□□□ -0.42
CACNB3-216ENST00000550391 E9PLN8 166 aa12.41□□□□□ -0.42
CACNB3-216ENST00000550391 ZNF670-ZNF695F2Z2N8 137 aa12.41□□□□□ -0.42
CACNB3-216ENST00000550391 TMCC2O75069 709 aa12.41□□□□□ -0.42
CACNB3-216ENST00000550391 CGAP01215 116 aa12.41□□□□□ -0.42
CACNB3-216ENST00000550391 SCG5P05408 212 aa12.41□□□□□ -0.42
CACNB3-216ENST00000550391 MPGP29372 298 aa12.41□□□□□ -0.42
CACNB3-216ENST00000550391 LSM6P62312 80 aaKnown RBP12.41□□□□□ -0.42
CACNB3-216ENST00000550391 ADAM8P78325 824 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms