RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 MEPEQ9NQ76 525 aaPredicted RBP5.68□□□□□ -1.5
UBE2N-204ENST00000549833 KLHL13Q9P2N7 655 aa5.68□□□□□ -1.5
UBE2N-204ENST00000549833 SEC14L4Q9UDX3 406 aa5.68□□□□□ -1.5
UBE2N-204ENST00000549833 CLEC4AQ9UMR7 237 aa5.68□□□□□ -1.5
UBE2N-204ENST00000549833 AURKCQ9UQB9 309 aa5.68□□□□□ -1.5
UBE2N-204ENST00000549833 HDGFL3Q9Y3E1 203 aa5.68□□□□□ -1.5
UBE2N-204ENST00000549833 FAM32AQ9Y421 112 aaKnown RBP5.68□□□□□ -1.5
UBE2N-204ENST00000549833 FLNBO75369 2602 aaKnown RBP5.68□□□□□ -1.5
UBE2N-204ENST00000549833 ARID1AO14497 2285 aa5.68□□□□□ -1.5
UBE2N-204ENST00000549833 TRAV36DV7A0A075B6V5 113 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 A0A087WUU8 490 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 TRBV4-1A0A0J9YWV2 114 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 DHRS12A0PJE2 317 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 SH2D7A6NKC9 451 aaPredicted RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 ENO4A6NNW6 628 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 ANKRD65E5RJM6 399 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 FTCDNL1E5RQL4 147 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 TSPAN4O14817 238 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 SMAD9O15198 467 aaKnown RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 DOK2O60496 412 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 FKBP6O75344 327 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 TIPRLO75663 272 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 AHSA1O95433 338 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 SCGB1D1O95968 90 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 CH25HO95992 272 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 LDLRP01130 860 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 BGLAPP02818 100 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 GPIP06744 558 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 H1F0P07305 194 aaKnown RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 HOXD4P09016 255 aaPredicted RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 LYL1P12980 280 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 NQO1P15559 274 aaKnown RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 ITGA2P17301 1181 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 FUT1P19526 365 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 FKBP2P26885 142 aaKnown RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 RRM2P31350 389 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 CEACAM8P31997 349 aaPredicted RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 IFNA8P32881 189 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 TIMP3P35625 211 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 MAGEA2P43356 314 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 CLK1P49759 484 aaKnown RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 CSNK2A1P68400 391 aaPredicted RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 SIRPAP78324 504 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 SLC35A1P78382 337 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 ARF1P84077 181 aaKnown RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 ST3GAL3Q11203 375 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 PPP1R8Q12972 351 aaKnown RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 KPNB1Q14974 876 aaKnown RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 TRAM2Q15035 370 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 SF3B4Q15427 424 aaKnown RBP eCLIP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 TBCEQ15813 527 aaPredicted RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 AWAT1Q58HT5 328 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 FGD3Q5JSP0 725 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 OTUD3Q5T2D3 398 aaPredicted RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 TMEM211Q6ICI0 200 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 PODNL1Q6PEZ8 512 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 PIWIL3Q7Z3Z3 882 aaKnown RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 C10orf53Q8N6V4 93 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 TMEM99Q8N816 258 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 MFSD8Q8NHS3 518 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 OSR1Q8TAX0 266 aaPredicted RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 RNF128Q8TEB7 428 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 ABHD3Q8WU67 409 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 TMEM239Q8WW34 195 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 RND1Q92730 232 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 CPNE4Q96A23 557 aaPredicted RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 SLCO4A1Q96BD0 722 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 INTS12Q96CB8 462 aaKnown RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 PIP5K1AQ99755 562 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 TMEM43Q9BTV4 400 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 ZNF426Q9BUY5 554 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 TAPBPLQ9BX59 468 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 NMNAT1Q9HAN9 279 aaPredicted RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 IL1RAPQ9NPH3 570 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 TIGARQ9NQ88 270 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 C20orf141Q9NUB4 165 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 PAQR5Q9NXK6 330 aaPredicted RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 VNN3Q9NY84 501 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 MCTS1Q9ULC4 181 aaKnown RBP5.67□□□□□ -1.5
UBE2N-204ENST00000549833 RNF6Q9Y252 685 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 TRAPPC4Q9Y296 219 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 ZNF175Q9Y473 711 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 CRYBG3Q68DQ2 2970 aa5.67□□□□□ -1.5
UBE2N-204ENST00000549833 A0A1W2PNV4 684 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 A0A1W2PRQ8 180 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 FAM90A7PA6NKC0 464 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 FAM90A22PA8MWA6 464 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 FAM90A12PA8MX19 464 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 FAM90A23PA8MXZ1 464 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 CYTIPO60759 359 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 TMCC2O75069 709 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 PTP4A3O75365 173 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 OR7A10O76100 309 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 RCBTB2O95199 551 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 GADD45GO95257 159 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 MBPP02686 304 aaPredicted RBP5.66□□□□□ -1.5
UBE2N-204ENST00000549833 THRBP10828 461 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 UMPSP11172 480 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 FCGR2AP12318 317 aa5.66□□□□□ -1.5
UBE2N-204ENST00000549833 IFI30P13284 250 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms