RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 MEP1BQ16820 701 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 ZMAT1Q5H9K5 638 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 IGFL2Q6UWQ7 119 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 ZNF704Q6ZNC4 412 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-215ENST00000547672 GALNTL5Q7Z4T8 443 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 GGNQ86UU5 652 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 VASH2Q86V25 355 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 ZNF676Q8N7Q3 588 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 SMAP2Q8WU79 429 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-215ENST00000547672 ABTB1Q969K4 478 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-215ENST00000547672 TMEM54Q969K7 222 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 MCHR2Q969V1 340 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 WDFY2Q96P53 400 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 KCNS3Q9BQ31 491 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 SLC30A2Q9BRI3 323 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 EMC6Q9BV81 110 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 ZNF552Q9H707 407 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-215ENST00000547672 SEC61A2Q9H9S3 476 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 SMURF1Q9HCE7 757 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 MRPL22Q9NWU5 206 aaKnown RBP11.97□□□□□ -0.49
PTCH1-215ENST00000547672 RABL2AQ9UBK7 228 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-215ENST00000547672 RABL2BQ9UNT1 228 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 POLR1DQ9Y2S0 133 aa11.97□□□□□ -0.49
PTCH1-215ENST00000547672 VPS13AQ96RL7 3174 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 ISPDA4D126 451 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 ACOD1A6NK06 481 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 CYTIPO60759 359 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 RPP14O95059 124 aaKnown RBP11.96□□□□□ -0.49
PTCH1-215ENST00000547672 ABHD16AO95870 558 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 UCHL1P09936 223 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 PRKAR1AP10644 381 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 NPR2P20594 1047 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 CLN3Q13286 438 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 TAF13Q15543 124 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 STK11Q15831 433 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 Q499Y3 187 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 HSD17B12Q53GQ0 312 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 C10orf128Q5T292 105 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 METAP1DQ6UB28 335 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-215ENST00000547672 MINDY2Q8NBR6 621 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 OR2G2Q8NGZ5 317 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 OR10D3Q8NH80 312 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 TRMT61AQ96FX7 289 aaKnown RBP11.96□□□□□ -0.49
PTCH1-215ENST00000547672 ADGRG7Q96K78 797 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 OR2M2Q96R28 347 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 RNF122Q9H9V4 155 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 SLCO1C1Q9NYB5 712 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 UGT2A1Q9Y4X1 527 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 AHCTF1Q8WYP5 2266 aa11.96□□□□□ -0.49
PTCH1-215ENST00000547672 EP300Q09472 2414 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-215ENST00000547672 A0A1W2PPL8 197 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 PINLYPA6NC86 204 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 CXCL13O43927 109 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 F10P00742 488 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 CD2P06729 351 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 RAB3BP20337 219 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 PSMB10P40306 273 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 TNFSF10P50591 281 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 CLDN15P56746 228 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 CLDN20P56880 219 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 C19orf57Q0VDD7 668 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 RNPS1Q15287 305 aaKnown RBP11.95□□□□□ -0.5
PTCH1-215ENST00000547672 ETFDHQ16134 617 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 ZNF181Q2M3W8 571 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 RIPPLY2Q5TAB7 128 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 TMEM244Q5VVB8 128 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 LYPD4Q6UWN0 246 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 RPTNQ6XPR3 784 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 FCRLAQ7L513 359 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 AAED1Q7RTV5 226 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 DCXRQ7Z4W1 244 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 C20orf196Q8IYI0 205 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 GPR137CQ8N3F9 429 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 ZADH2Q8N4Q0 377 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 TMEM251Q8N6I4 163 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 RNF133Q8WVZ7 376 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 C11orf40Q8WZ69 217 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 RELTQ969Z4 430 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 TMEM45BQ96B21 275 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 CCDC32Q9BV29 185 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 PRRG4Q9BZD6 226 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 LDAHQ9H6V9 325 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 EXO5Q9H790 373 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 SLC24A3Q9HC58 644 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 GP6Q9HCN6 339 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 TCF7L1Q9HCS4 588 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 FRRS1LQ9P0K9 344 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 ABRACLQ9P1F3 81 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 PLEKHB1Q9UF11 243 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-215ENST00000547672 CYB5R1Q9UHQ9 305 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 R4GMQ9 66 aa11.95□□□□□ -0.5
PTCH1-215ENST00000547672 IGKV3D-15A0A087WSY6 115 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 NOTOA8MTQ0 251 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 SMAD9O15198 467 aaKnown RBP11.94□□□□□ -0.5
PTCH1-215ENST00000547672 DHHO43323 396 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 CEACAM4O75871 244 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 ZFPL1O95159 310 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 BMP4P12644 408 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 SRMP19623 302 aa11.94□□□□□ -0.5
PTCH1-215ENST00000547672 MSR1P21757 451 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms