RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 CD302Q8IX05 232 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 LYG1Q8N1E2 194 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF614Q8N883 585 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 OR4Q3Q8NH05 313 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 ANGPTL6Q8NI99 470 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF502Q8TBZ5 544 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 VN1R17PQ8TDU5 208 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 ISOC2Q96AB3 205 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 CMTM7Q96FZ5 175 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 ARL5BQ96KC2 179 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 POM121L2Q96KW2 1035 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 NAPGQ99747 312 aaPredicted RBP3.36□□□□□ -1.87
SCAF11-210ENST00000547654 PAIP2Q9BPZ3 127 aaKnown RBP3.36□□□□□ -1.87
SCAF11-210ENST00000547654 TMEM246Q9BRR3 403 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 ISG20L2Q9H9L3 353 aaKnown RBP3.36□□□□□ -1.87
SCAF11-210ENST00000547654 STX18Q9P2W9 335 aaKnown RBP3.36□□□□□ -1.87
SCAF11-210ENST00000547654 CTSFQ9UBX1 484 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 RSPH14Q9UHP6 348 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 SH3TC1Q8TE82 1336 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 NHSQ6T4R5 1651 aa3.36□□□□□ -1.87
SCAF11-210ENST00000547654 PKD1L2Q7Z442 2459 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 KIF13BQ9NQT8 1826 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 ARFGEF1Q9Y6D6 1849 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 IGHV3-16A0A0C4DH30 117 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 E7EWF7 191 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 E9PAM4 449 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 MGRN1O60291 552 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 SLC19A2O60779 497 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 SEMA4FO95754 770 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 ACSM4P0C7M7 580 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 TCN1P20061 433 aaPredicted RBP3.35□□□□□ -1.87
SCAF11-210ENST00000547654 ATP6V1B2P21281 511 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 IGHV1-2P23083 117 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 NTSP30990 170 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 HTR2BP41595 481 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 UBE2MP61081 183 aaKnown RBP3.35□□□□□ -1.87
SCAF11-210ENST00000547654 FCHO2Q0JRZ9 810 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 ECH1Q13011 328 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 COTL1Q14019 142 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 TRAM2Q15035 370 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 PSMD5Q16401 504 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 NSUN5P1Q3KNT7 163 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 C9orf66Q5T8R8 295 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 C6orf89Q6UWU4 347 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF497Q6ZNH5 498 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 ACOT7LQ6ZUV0 252 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 PID1Q7Z2X4 250 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 PRR22Q8IZ63 422 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 C4orf32Q8N8J7 132 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 Q8NBF4 154 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 MAPK1IP1LQ8NDC0 245 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 OR4D6Q8NGJ1 314 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 OR5K2Q8NHB8 316 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 TCP10LQ8TDR4 215 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 MYDGFQ969H8 173 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 CCDC124Q96CT7 223 aaKnown RBP3.35□□□□□ -1.87
SCAF11-210ENST00000547654 KLHDC3Q9BQ90 382 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 FAIM2Q9BWQ8 316 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 ZBP1Q9H171 429 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 SIAEQ9HAT2 523 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF302Q9NR11 478 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 UBAP1Q9NZ09 502 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 ADA2Q9NZK5 511 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 OR1A1Q9P1Q5 309 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 DPM3Q9P2X0 92 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF229Q9UJW7 825 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 YARS2Q9Y2Z4 477 aaKnown RBP3.35□□□□□ -1.87
SCAF11-210ENST00000547654 GOLT1BQ9Y3E0 138 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 CDH10Q9Y6N8 788 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 UBN2Q6ZU65 1347 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 CNTNAP1P78357 1384 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 RIMS2Q9UQ26 1411 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 ATP7BP35670 1465 aa3.35□□□□□ -1.87
SCAF11-210ENST00000547654 TIAM2Q8IVF5 1701 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 IGHV1OR21-1A0A087WYE8 117 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 IGKV6D-41A0A0C4DH26 115 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 GLYATL1P3A0A0U1RQE8 302 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 RPL37AP8A6NKH3 93 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 KRTAP16-1A8MUX0 517 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 E9PQ18 207 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 K7ENP7 123 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 PLPP1O14494 284 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 XRCC2O43543 280 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 GJB5O95377 273 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 IGHV2-5P01817 119 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 PIGRP01833 764 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 SERPINA5P05154 406 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 STSP08842 583 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 LAMP1P11279 417 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 TBPP20226 339 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 LMO4P61968 165 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 ACTA2P62736 377 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 ACTG2P63267 376 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 ACTC1P68032 377 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 ACTA1P68133 377 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 ORC2Q13416 577 aaPredicted RBP3.34□□□□□ -1.87
SCAF11-210ENST00000547654 CYLC2Q14093 348 aaPredicted RBP3.34□□□□□ -1.87
SCAF11-210ENST00000547654 TSC22D1Q15714 1073 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 GABRA6Q16445 453 aa3.34□□□□□ -1.87
SCAF11-210ENST00000547654 PGGHGQ32M88 737 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms