RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 A0A1W2PPL8 197 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 H7C1C5 153 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 GPRIN2O60269 458 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 LY6G6DO95868 133 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 TXNDC12O95881 172 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 ERCC1P07992 297 aaPredicted RBP13.7□□□□□ -0.22
DDX54-204ENST00000546898 SLC25A16P16260 332 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 MSR1P21757 451 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 APLNRP35414 380 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 PCBD1P61457 104 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 LCN6P62502 163 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 PABPC1L2AQ5JQF8 200 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 C1orf94Q6P1W5 598 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 SYT9Q86SS6 491 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 SVOPLQ8N434 492 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 ZNF525Q8N782 197 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 FAM168AQ92567 244 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 RASD2Q96D21 266 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 GPA33Q99795 319 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 VRK1Q99986 396 aaPredicted RBP13.7□□□□□ -0.22
DDX54-204ENST00000546898 TRIM15Q9C019 465 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 RAB1BQ9H0U4 201 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 DYNLRB1Q9NP97 96 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 VSX1Q9NZR4 365 aaPredicted RBP13.7□□□□□ -0.22
DDX54-204ENST00000546898 LYVE1Q9Y5Y7 322 aa13.7□□□□□ -0.22
DDX54-204ENST00000546898 NAV3Q8IVL0 2385 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 ABCA1O95477 2261 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 IGHV4-30-2A0A087WSY4 118 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 TMEM129A0AVI4 362 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 IMPA2O14732 288 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 LAP3P28838 519 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 PCSK6P29122 969 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 SLC6A6P31641 620 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 GSSP48637 474 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 HMGA2P52926 109 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 MS4A2Q01362 244 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 TSPAN31Q12999 210 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 RFX4Q33E94 735 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 DNAL1Q4LDG9 190 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 FAM98BQ52LJ0 330 aaKnown RBP13.69□□□□□ -0.22
DDX54-204ENST00000546898 GNPDA2Q8TDQ7 276 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 MRPL37Q9BZE1 423 aaKnown RBP13.69□□□□□ -0.22
DDX54-204ENST00000546898 BCL2L14Q9BZR8 327 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 OR52D1Q9H346 318 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 POLE4Q9NR33 117 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 IER3IP1Q9Y5U9 82 aa13.69□□□□□ -0.22
DDX54-204ENST00000546898 YLPM1P49750 1951 aaKnown RBP13.69□□□□□ -0.22
DDX54-204ENST00000546898 NIPBLQ6KC79 2804 aaeCLIP13.68□□□□□ -0.22
DDX54-204ENST00000546898 C12orf71A8MTZ7 269 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 M0R233 179 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 NDUFS8O00217 210 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 TNFRSF11BO00300 401 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 SOCS2O14508 198 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 ARPC3O15145 178 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 SYNGR3O43761 229 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 UBOX5O94941 541 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 CTLA4P16410 223 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 APEX1P27695 318 aaKnown RBP13.68□□□□□ -0.22
DDX54-204ENST00000546898 RAD52P43351 418 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 PDLIM4P50479 330 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 TRAP1Q12931 704 aaKnown RBP13.68□□□□□ -0.22
DDX54-204ENST00000546898 MSMPQ1L6U9 139 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 RGS7BPQ6MZT1 257 aaPredicted RBP13.68□□□□□ -0.22
DDX54-204ENST00000546898 RPL13AP3Q6NVV1 102 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 PGBD2Q6P3X8 592 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 DNM1P34Q6PK57 102 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 ALDH16A1Q8IZ83 802 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 PAQR4Q8N4S7 273 aaPredicted RBP13.68□□□□□ -0.22
DDX54-204ENST00000546898 C10orf105Q8TEF2 133 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 NEU4Q8WWR8 484 aaPredicted RBP13.68□□□□□ -0.22
DDX54-204ENST00000546898 CCDC124Q96CT7 223 aaKnown RBP13.68□□□□□ -0.22
DDX54-204ENST00000546898 LRGUKQ96M69 825 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 SNX18Q96RF0 628 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 THTPAQ9BU02 230 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 OR2H1Q9GZK4 316 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 SYT4Q9H2B2 425 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 IL20RAQ9UHF4 553 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 TIMM10BQ9Y5J6 103 aa13.68□□□□□ -0.22
DDX54-204ENST00000546898 FN1P02751 2386 aaKnown RBP13.67□□□□□ -0.22
DDX54-204ENST00000546898 A0A096LNT2 108 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 KHDRBS3O75525 346 aaKnown RBP13.67□□□□□ -0.22
DDX54-204ENST00000546898 PPP1R3DO95685 299 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 CCL2P13500 99 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 HOXB6P17509 224 aaKnown RBP13.67□□□□□ -0.22
DDX54-204ENST00000546898 STOMP27105 288 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 PSG4Q00888 419 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 SCRN3Q0VDG4 424 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 ENDOGQ14249 297 aaKnown RBP13.67□□□□□ -0.22
DDX54-204ENST00000546898 GK3PQ14409 553 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 UNQ6126/PRO20091Q6UXV3 157 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 ZNF620Q6ZNG0 422 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 CPEB3Q8NE35 698 aaKnown RBP13.67□□□□□ -0.22
DDX54-204ENST00000546898 OR4C15Q8NGM1 316 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 POM121L2Q96KW2 1035 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 ERMAPQ96PL5 475 aaPredicted RBP13.67□□□□□ -0.22
DDX54-204ENST00000546898 ZNF416Q9BWM5 594 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 WNT5BQ9H1J7 359 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 MS4A5Q9H3V2 200 aa13.67□□□□□ -0.22
DDX54-204ENST00000546898 AQP12BA6NM10 295 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 ACOT8O14734 319 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms