RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 TMEM176BQ3YBM2 270 aaPredicted RBP11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 NPSR1Q6W5P4 371 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 PRR18Q8N4B5 295 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 OR52B4Q8NGK2 314 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 ST8SIA2Q92186 375 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 GPATCH2Q9NW75 528 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 NEU3Q9UQ49 428 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 SERPINF1P36955 418 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 MAGEB1P43366 347 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 GABREP78334 506 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 INSL4Q14641 139 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 GLYR1Q49A26 553 aaPredicted RBP11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 MKXQ8IYA7 352 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 KDM8Q8N371 416 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 OR11A1Q9GZK7 315 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 LRIT1Q9P2V4 623 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 OR7C1O76099 320 aaPredicted RBP11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 EEF1A1P68104 462 aaKnown RBP11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 MRPS21P82921 87 aaKnown RBP11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 ST3GAL2Q16842 350 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 HIST2H3PS2Q5TEC6 136 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 BCORP1Q8N888 145 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 PIGCQ92535 297 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 SLC6A18Q96N87 628 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 TSSK2Q96PF2 358 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 FBXL4Q9UKA2 621 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 XRCC3O43542 346 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 PLPP2O43688 288 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 YBX1P67809 324 aaKnown RBP11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 TLE4Q04727 773 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 SSBP1Q04837 148 aaKnown RBP11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 MFAP5Q13361 173 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 GRINAQ7Z429 371 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 ZFP82Q8N141 532 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 ARIH2OSQ8N7S6 290 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 WDR34Q96EX3 536 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 WDR89Q96FK6 387 aaPredicted RBP11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 MAP3K3Q99759 626 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 B3GALT5Q9Y2C3 310 aa11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 EXOGQ9Y2C4 368 aaKnown RBP11.16□□□□□ -0.62
NPC1L1-204ENST00000546276 TAAR5O14804 337 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 RAB4BP61018 213 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 PCBD1P61457 104 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 ZNF266Q14584 549 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 KIAA0895LQ68EN5 471 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 LRRC18Q8N456 261 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 PHOSPHO2Q8TCD6 241 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 CPNE4Q96A23 557 aaPredicted RBP11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 UQCC2Q9BRT2 126 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 ZNF346Q9UL40 294 aaKnown RBP11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 PRSS44E7EML9 344 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 PPM1DO15297 605 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 WNT1P04628 370 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 CLDN17P56750 224 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 SRYQ05066 204 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 RPL18Q07020 188 aaKnown RBP11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 FAM74A1Q5RGS3 127 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 ZFPM2Q8WW38 1151 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 NKX2-4Q9H2Z4 354 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 MYO9BQ13459 2157 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 PYCARD-AS1I3L0S3 204 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 TNFRSF10CO14798 259 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 HOXD11P31277 338 aaPredicted RBP11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 IRF3Q14653 427 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 CLINT1Q14677 625 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 TMEM81Q6P7N7 255 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 OGFOD3Q6PK18 319 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 H1FNTQ75WM6 255 aaPredicted RBP11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 C10orf111Q8N326 155 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 FBXL6Q8N531 539 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 OR52H1Q8NGJ2 320 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 OR2G2Q8NGZ5 317 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 C2CD4CQ8TF44 421 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 IL1F10Q8WWZ1 152 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 NANOS1Q8WY41 292 aaKnown RBP11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 NARFLQ9H6Q4 476 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 DLL4Q9NR61 685 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 SLC22A11Q9NSA0 550 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 SUSD2Q9UGT4 822 aa11.15□□□□□ -0.62
NPC1L1-204ENST00000546276 TRIP11Q15643 1979 aa11.15□□□□□ -0.63
NPC1L1-204ENST00000546276 ANKRD30BLA7E2S9 258 aa11.15□□□□□ -0.63
NPC1L1-204ENST00000546276 ACKR1Q16570 336 aa11.15□□□□□ -0.63
NPC1L1-204ENST00000546276 OPN5Q6U736 354 aa11.15□□□□□ -0.63
NPC1L1-204ENST00000546276 OR1M1Q8NGA1 313 aa11.15□□□□□ -0.63
NPC1L1-204ENST00000546276 JAM3Q9BX67 310 aa11.15□□□□□ -0.63
NPC1L1-204ENST00000546276 PLEKHA3Q9HB20 300 aa11.15□□□□□ -0.63
NPC1L1-204ENST00000546276 NIT2Q9NQR4 276 aa11.15□□□□□ -0.63
NPC1L1-204ENST00000546276 OR5K3A6NET4 321 aa11.14□□□□□ -0.63
NPC1L1-204ENST00000546276 CD38P28907 300 aa11.14□□□□□ -0.63
NPC1L1-204ENST00000546276 CD79BP40259 229 aa11.14□□□□□ -0.63
NPC1L1-204ENST00000546276 PCBP4P57723 403 aaKnown RBP11.14□□□□□ -0.63
NPC1L1-204ENST00000546276 SNRPNP63162 240 aaKnown RBP11.14□□□□□ -0.63
NPC1L1-204ENST00000546276 ZNF74Q16587 644 aa11.14□□□□□ -0.63
NPC1L1-204ENST00000546276 TMEM31Q5JXX7 168 aa11.14□□□□□ -0.63
NPC1L1-204ENST00000546276 RNLSQ5VYX0 342 aa11.14□□□□□ -0.63
NPC1L1-204ENST00000546276 BAP18Q8IXM2 172 aa11.14□□□□□ -0.63
NPC1L1-204ENST00000546276 CLRN3Q8NCR9 226 aa11.14□□□□□ -0.63
NPC1L1-204ENST00000546276 HSD17B8Q92506 261 aa11.14□□□□□ -0.63
NPC1L1-204ENST00000546276 RSC1A1Q92681 617 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms