RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 ZNF679Q8IYX0 411 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 ZNF721Q8TF20 911 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 PTDSS2Q9BVG9 487 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 TMPRSS13Q9BYE2 586 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 TINAGL1Q9GZM7 467 aaPredicted RBP14.23□□□□□ -0.13
LDLR-204ENST00000545707 LAT2Q9GZY6 243 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 POFUT1Q9H488 388 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 KIF25Q9UIL4 384 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 MRPS18BQ9Y676 258 aaKnown RBP14.23□□□□□ -0.13
LDLR-204ENST00000545707 LOC100289279A0A1B0GTE1 492 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 C2orf72A6NCS6 295 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 SLC17A2O00624 439 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 CDC40O60508 579 aaKnown RBP eCLIP14.22□□□□□ -0.13
LDLR-204ENST00000545707 SLC25A12O75746 678 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 LIPCP11150 499 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 IL11P20809 199 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 C4BPBP20851 252 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 TMEM225Q6GV28 225 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 C9orf40Q8IXQ3 194 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 CLEC1AQ8NC01 280 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 ASB5Q8WWX0 329 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 APMAPQ9HDC9 416 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 PDE7BQ9NP56 450 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 DHDHQ9UQ10 334 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 TRAV36DV7A0A075B6V5 113 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 BLACEA4D250 179 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 MFSD2BA6NFX1 497 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 SHISA7A6NL88 538 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 TMEM150CB9EJG8 249 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 TSPAN4O14817 238 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 SDC3O75056 442 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 ALOX12BO75342 701 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 RP2O75695 350 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 IGKV3-11P04433 115 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 CSN2P05814 226 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 SPOCK1Q08629 439 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 EIF2B1Q14232 305 aaKnown RBP14.22□□□□□ -0.13
LDLR-204ENST00000545707 DEFB133Q30KQ1 61 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 MOGAT2Q3SYC2 334 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 TSSK4Q6SA08 328 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 C16orf47Q6ZP98 133 aaPredicted RBP14.22□□□□□ -0.13
LDLR-204ENST00000545707 C17orf107Q6ZR85 190 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 PRSS42Q7Z5A4 293 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 GABRG1Q8N1C3 465 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 GALNT16Q8N428 558 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 ADAMTS18Q8TE60 1221 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 RNF128Q8TEB7 428 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 ZNF285Q96NJ3 590 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 NPAS1Q99742 590 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 ABHD6Q9BV23 337 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 FBXL2Q9UKC9 423 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 FBXO4Q9UKT5 387 aa14.22□□□□□ -0.13
LDLR-204ENST00000545707 FRG2CA6NGY1 282 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 SPDEFO95238 335 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 GABRA1P14867 456 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 BLKP51451 505 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 RPL27P61353 136 aaKnown RBP14.21□□□□□ -0.13
LDLR-204ENST00000545707 BTN1A1Q13410 526 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 CCINQ13939 588 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 SLC18B1Q6NT16 456 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 SLC25A28Q96A46 364 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 C8orf44Q96CB5 159 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 SEH1LQ96EE3 360 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 TBL1XR1Q9BZK7 514 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 CUTCQ9NTM9 273 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 TAS2R8Q9NYW2 309 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 COA3Q9Y2R0 106 aaPredicted RBP14.21□□□□□ -0.13
LDLR-204ENST00000545707 LRP12Q9Y561 859 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 THADAQ6YHU6 1953 aa14.21□□□□□ -0.13
LDLR-204ENST00000545707 IGLV1-36A0A0B4J1U3 117 aa14.21□□□□□ -0.14
LDLR-204ENST00000545707 LOC101059948A0A1B0GTJ6 334 aa14.21□□□□□ -0.14
LDLR-204ENST00000545707 A0A1W2PPC4 97 aa14.21□□□□□ -0.14
LDLR-204ENST00000545707 OR6C65A6NJZ3 312 aa14.21□□□□□ -0.14
LDLR-204ENST00000545707 SHISA6Q6ZSJ9 500 aa14.21□□□□□ -0.14
LDLR-204ENST00000545707 MAMDC2Q7Z304 686 aaPredicted RBP14.21□□□□□ -0.14
LDLR-204ENST00000545707 WDFY1Q8IWB7 410 aa14.21□□□□□ -0.14
LDLR-204ENST00000545707 GPR119Q8TDV5 335 aa14.21□□□□□ -0.14
LDLR-204ENST00000545707 GPX8Q8TED1 209 aa14.21□□□□□ -0.14
LDLR-204ENST00000545707 NKD1Q969G9 470 aa14.21□□□□□ -0.14
LDLR-204ENST00000545707 SLC25A44Q96H78 314 aaPredicted RBP14.21□□□□□ -0.14
LDLR-204ENST00000545707 CMKLR1Q99788 373 aa14.21□□□□□ -0.14
LDLR-204ENST00000545707 TTYH1Q9H313 450 aaPredicted RBP14.21□□□□□ -0.14
LDLR-204ENST00000545707 EPHA6Q9UF33 1036 aa14.21□□□□□ -0.14
LDLR-204ENST00000545707 FARSAQ9Y285 508 aaKnown RBP14.21□□□□□ -0.14
LDLR-204ENST00000545707 EMC9Q9Y3B6 208 aa14.21□□□□□ -0.14
LDLR-204ENST00000545707 FREM3P0C091 2139 aa14.21□□□□□ -0.14
LDLR-204ENST00000545707 ASXL3Q9C0F0 2248 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 LOC100509620A0A075B734 347 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 C10orf142B7Z368 130 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 H0YIG0 161 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 HOXD4P09016 255 aaPredicted RBP14.2□□□□□ -0.14
LDLR-204ENST00000545707 GP1BBP13224 206 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 ZNF28P17035 718 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 FMODQ06828 376 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 PLCXD2Q0VAA5 305 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 EBPQ15125 230 aaKnown RBP14.2□□□□□ -0.14
LDLR-204ENST00000545707 TEX30Q5JUR7 227 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 COL13A1Q5TAT6 717 aaPredicted RBP14.2□□□□□ -0.14
LDLR-204ENST00000545707 FAM166AQ6J272 317 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 LRFN4Q6PJG9 635 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms