RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 MBNL3Q9NUK0 354 aaKnown RBP6.4□□□□□ -1.38
CPSF7-224ENST00000544990 B3GNT2Q9NY97 397 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 ACTR3BQ9P1U1 418 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 ZNF346Q9UL40 294 aaKnown RBP6.4□□□□□ -1.38
CPSF7-224ENST00000544990 V9GYQ6 96 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 F8P00451 2351 aa6.4□□□□□ -1.39
CPSF7-224ENST00000544990 USF3Q68DE3 2245 aa6.4□□□□□ -1.39
CPSF7-224ENST00000544990 OTOGQ6ZRI0 2925 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 TRAV27A0A087WT01 109 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 SCO2A0A1W2PP80 73 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 FAM171A2A8MVW0 826 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 XKRYO14609 159 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 PSPNO60542 156 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 PDE5AO76074 875 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 DIRAS1O95057 198 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 NDUFB2O95178 105 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 PTHP01270 115 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 CD8AP01732 235 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 IGHMP01871 453 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 HLA-HP01893 362 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 NPR2P20594 1047 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 ACVR1BP36896 505 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 IFNGR2P38484 337 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 GPR4P46093 362 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 PTDSS1P48651 473 aaKnown RBP6.39□□□□□ -1.39
CPSF7-224ENST00000544990 ZNF133P52736 654 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-224ENST00000544990 MYBPC1Q00872 1141 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 SPIBQ01892 262 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 PLP2Q04941 152 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 TOP3AQ13472 1001 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-224ENST00000544990 TRIM25Q14258 630 aaKnown RBP6.39□□□□□ -1.39
CPSF7-224ENST00000544990 SLC36A2Q495M3 483 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 THEM4Q5T1C6 240 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 C10orf128Q5T292 105 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 ARMC4Q5T2S8 1044 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 TMEM53Q6P2H8 277 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 B3GLCTQ6Y288 498 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 RINLQ6ZS11 566 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 SLC16A14Q7RTX9 510 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 TRPM8Q7Z2W7 1104 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 DHFR2Q86XF0 187 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 WFDC3Q8IUB2 231 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 KRTAP1-3Q8IUG1 177 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 ZDHHC21Q8IVQ6 265 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 WDFY1Q8IWB7 410 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 SKA3Q8IX90 412 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 FAM86B1Q8N7N1 296 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 OR4K5Q8NGD3 323 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 OR13C2Q8NGS9 318 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 OR52J3Q8NH60 311 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 ABHD4Q8TB40 342 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 FBXO17Q96EF6 278 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 C18orf12Q96KH6 178 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 SEPHS2Q99611 448 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 ALG12Q9BV10 488 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 CACNG6Q9BXT2 260 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 SMURF2Q9HAU4 748 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 IL1RAPQ9NPH3 570 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 CA10Q9NS85 328 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 TMEM38BQ9NVV0 291 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 GRHPRQ9UBQ7 328 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 FBXO9Q9UK97 447 aaPredicted RBP6.39□□□□□ -1.39
CPSF7-224ENST00000544990 TMCC3Q9ULS5 477 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 PRPF19Q9UMS4 504 aaKnown RBP6.39□□□□□ -1.39
CPSF7-224ENST00000544990 SPEF1Q9Y4P9 236 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 PLCE1Q9P212 2302 aa6.39□□□□□ -1.39
CPSF7-224ENST00000544990 SETD2Q9BYW2 2564 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-224ENST00000544990 IGHV2OR16-5A0A0B4J2B6 119 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 TRBV4-1A0A0J9YWV2 114 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 IQCMA0A1B0GVH7 501 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 SH3PXD2BA1X283 911 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 ZNF503-AS2A6NEH8 195 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 B9A039 149 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 CDC42EP2O14613 210 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 AHCYL1O43865 530 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 PTP4A3O75365 173 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 KRT36O76013 467 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 SEMG1P04279 462 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 SERPINA5P05154 406 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 RNASE1P07998 156 aaKnown RBP6.38□□□□□ -1.39
CPSF7-224ENST00000544990 CD14P08571 375 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 CELA3BP08861 270 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 INHBBP09529 407 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 T-ENOLP0DO92 83 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 ZNF14P17017 642 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-224ENST00000544990 CALCRP30988 508 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 RRM2P31350 389 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 SERPINF1P36955 418 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 OMPP47874 163 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 SNRPD2P62316 118 aaKnown RBP6.38□□□□□ -1.39
CPSF7-224ENST00000544990 ERVK-25P63136 954 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 MRPS34P82930 218 aaKnown RBP6.38□□□□□ -1.39
CPSF7-224ENST00000544990 GALK2Q01415 458 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 RUNX1T1Q06455 604 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 DAG1Q14118 895 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 CLEC12BQ2HXU8 276 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 IQCCQ4KMZ1 466 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 STEAP3Q658P3 488 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 GPR139Q6DWJ6 353 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 C11orf71Q6IPW1 123 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms