RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ZDHHC21Q8IVQ6 265 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 LRRC18Q8N456 261 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 OR52J3Q8NH60 311 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 C10orf105Q8TEF2 133 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 C11orf40Q8WZ69 217 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 NABP1Q96AH0 204 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 DOK1Q99704 481 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 PIMREGQ9BSJ6 248 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 FUZQ9BT04 418 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 TRIM15Q9C019 465 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 NRIP3Q9NQ35 241 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 EIF3KQ9UBQ5 218 aaKnown RBP10.19□□□□□ -0.78
HDAC4-216ENST00000544989 UGT2A1Q9Y4X1 527 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 TIMM10BQ9Y5J6 103 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 V9GYQ6 96 aa10.19□□□□□ -0.78
HDAC4-216ENST00000544989 M0R233 179 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 TLX2O43763 284 aaPredicted RBP10.18□□□□□ -0.78
HDAC4-216ENST00000544989 IDH3BO43837 385 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 OR10H3O60404 316 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 DIRAS1O95057 198 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 TXNDC12O95881 172 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 MT-ND5P03915 603 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 MMP7P09237 267 aaPredicted RBP10.18□□□□□ -0.78
HDAC4-216ENST00000544989 PATE4P0C8F1 98 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 FUT4P22083 530 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 CRABP1P29762 137 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 RRM2P31350 389 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 SLC6A6P31641 620 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 CDAP32320 146 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 MSX2P35548 267 aaPredicted RBP10.18□□□□□ -0.78
HDAC4-216ENST00000544989 GDI2P50395 445 aaKnown RBP10.18□□□□□ -0.78
HDAC4-216ENST00000544989 HMGA2P52926 109 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 FMODQ06828 376 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 LOXL1Q08397 574 aaPredicted RBP10.18□□□□□ -0.78
HDAC4-216ENST00000544989 KRR1Q13601 381 aaKnown RBP10.18□□□□□ -0.78
HDAC4-216ENST00000544989 GK3PQ14409 553 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 SEC23BQ15437 767 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 FAM98BQ52LJ0 330 aaKnown RBP10.18□□□□□ -0.78
HDAC4-216ENST00000544989 PABPC1L2AQ5JQF8 200 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 LCN8Q6JVE9 175 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 DNM1P34Q6PK57 102 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 FAM122BQ7Z309 247 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 MEX3DQ86XN8 651 aaKnown RBP10.18□□□□□ -0.78
HDAC4-216ENST00000544989 SVOPLQ8N434 492 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 ZNF525Q8N782 197 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 FGFBP3Q8TAT2 258 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 FANK1Q8TC84 345 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 ASB9Q96DX5 294 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 LRGUKQ96M69 825 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 SORCS2Q96PQ0 1159 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 SMR3AQ99954 134 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 SLCO1C1Q9NYB5 712 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 FAM53CQ9NYF3 392 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 REV1Q9UBZ9 1251 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 NDRG4Q9ULP0 352 aaKnown RBP10.18□□□□□ -0.78
HDAC4-216ENST00000544989 ADAM18Q9Y3Q7 739 aa10.18□□□□□ -0.78
HDAC4-216ENST00000544989 IGHV4-30-2A0A087WSY4 118 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 TEX13CA0A0J9YWL9 993 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 A0A1W2PPL8 197 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 TMEM129A0AVI4 362 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 H3BSA7 217 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 ARPC3O15145 178 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 GPRIN2O60269 458 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 KHDRBS3O75525 346 aaKnown RBP10.17□□□□□ -0.78
HDAC4-216ENST00000544989 COX5BP10606 129 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 ZNF32P17041 273 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 USF1P22415 310 aaPredicted RBP10.17□□□□□ -0.78
HDAC4-216ENST00000544989 TUBG1P23258 451 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 STOMP27105 288 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 LAP3P28838 519 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 MAGEA2P43356 314 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 UCP2P55851 309 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 KLF3P57682 345 aaPredicted RBP10.17□□□□□ -0.78
HDAC4-216ENST00000544989 SCRN3Q0VDG4 424 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 RFX4Q33E94 735 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 DNAL1Q4LDG9 190 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 MESTQ5EB52 335 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 CYP2R1Q6VVX0 501 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 TRPM8Q7Z2W7 1104 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 ZER1Q7Z7L7 766 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 JAZF1Q86VZ6 243 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 GLB1L2Q8IW92 636 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 BCAS4Q8TDM0 211 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 GNPDA2Q8TDQ7 276 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 SNX33Q8WV41 574 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 Q96M85 177 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 SNX18Q96RF0 628 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 MRPL37Q9BZE1 423 aaKnown RBP10.17□□□□□ -0.78
HDAC4-216ENST00000544989 OR2H1Q9GZK4 316 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 ELOVL3Q9HB03 270 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 POLE4Q9NR33 117 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 TUBG2Q9NRH3 451 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 VSX1Q9NZR4 365 aaPredicted RBP10.17□□□□□ -0.78
HDAC4-216ENST00000544989 IER3IP1Q9Y5U9 82 aa10.17□□□□□ -0.78
HDAC4-216ENST00000544989 ABCA1O95477 2261 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 IGKV1D-43A0A0B4J1Z2 117 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 A0A1W2PPW3 197 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 TNFRSF11BO00300 401 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 CD5LO43866 347 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 RENP00797 406 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms