RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.31□□□□□ -1.08
CIT-216ENST00000544872 SLC22A23A1A5C7 686 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 KLF4O43474 513 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 B4GALT1P15291 398 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 MSR1P21757 451 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 PTDSS1P48651 473 aaKnown RBP8.31□□□□□ -1.08
CIT-216ENST00000544872 RAB1AP62820 205 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 MRPS34P82930 218 aaKnown RBP8.31□□□□□ -1.08
CIT-216ENST00000544872 DEFA6Q01524 100 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 NPRL3Q12980 569 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 HIST3H3Q16695 136 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 SLC35F1Q5T1Q4 408 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 C10orf128Q5T292 105 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 LRFN4Q6PJG9 635 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 ZNF627Q7L945 461 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 AMIGO2Q86SJ2 522 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 PROKR2Q8NFJ6 384 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 OR4F15Q8NGB8 312 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 OR2AJ1Q8NGZ0 328 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 ZNF519Q8TB69 540 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 LRTOMTQ8WZ04 291 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 HDAC2Q92769 488 aaKnown RBP8.31□□□□□ -1.08
CIT-216ENST00000544872 UTP4Q969X6 686 aaKnown RBP8.31□□□□□ -1.08
CIT-216ENST00000544872 EME1Q96AY2 570 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 SLCO4A1Q96BD0 722 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 KCNK17Q96T54 332 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 C9orf16Q9BUW7 83 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 C1QTNF6Q9BXI9 259 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 NELFAQ9H3P2 528 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 EGLN3Q9H6Z9 239 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 S100A14Q9HCY8 104 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 SRA1Q9HD15 236 aaKnown RBP8.31□□□□□ -1.08
CIT-216ENST00000544872 TMEM38BQ9NVV0 291 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 TIMM10BQ9Y5J6 103 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 SLC25A15Q9Y619 301 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 DNAJC13O75165 2243 aa8.31□□□□□ -1.08
CIT-216ENST00000544872 A0A1W2PR80 420 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 ERICH4A6NGS2 130 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 SOX14O95416 240 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 PRKACGP22612 351 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 IGFBP5P24593 272 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 EDNRAP25101 427 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 CD40P25942 277 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 LAP3P28838 519 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 GRK5P34947 590 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 APLNRP35414 380 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 GIPRP48546 466 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 PIGFQ07326 219 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.3□□□□□ -1.08
CIT-216ENST00000544872 SCRN3Q0VDG4 424 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 TBC1D28Q2M2D7 210 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 NCMAPQ5T1S8 102 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 FAM27BQ5VT28 67 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 ZNF770Q6IQ21 691 aaPredicted RBP8.3□□□□□ -1.08
CIT-216ENST00000544872 NHLRC1Q6VVB1 395 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 ZNF704Q6ZNC4 412 aaPredicted RBP8.3□□□□□ -1.08
CIT-216ENST00000544872 C20orf204Q6ZNR8 217 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 ZNF771Q7L3S4 317 aaPredicted RBP8.3□□□□□ -1.08
CIT-216ENST00000544872 SYT9Q86SS6 491 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 C1orf174Q8IYL3 243 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 LNX2Q8N448 690 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 LRRC18Q8N456 261 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 LRRC75AQ8NAA5 344 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 OR4K13Q8NH42 304 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 PIGTQ969N2 578 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 RASD2Q96D21 266 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 NMNAT3Q96T66 252 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 GPA33Q99795 319 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 SYT4Q9H2B2 425 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 SEMA6AQ9H2E6 1030 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 CDH20Q9HBT6 801 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 C8orf4Q9NR00 106 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 VSX1Q9NZR4 365 aaPredicted RBP8.3□□□□□ -1.08
CIT-216ENST00000544872 GPR160Q9UJ42 338 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 FKBP7Q9Y680 259 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 ATP23Q9Y6H3 246 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 EML6Q6ZMW3 1958 aa8.3□□□□□ -1.08
CIT-216ENST00000544872 TRIM64A6NGJ6 449 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 TRIM64BA6NI03 449 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 SNTNA6NMZ2 147 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 PRR23D1E9PI22 279 aaPredicted RBP8.29□□□□□ -1.08
CIT-216ENST00000544872 ABCD4O14678 606 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 SLC2A10O95528 541 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 HLA-HP01893 362 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 HRGP04196 525 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 THBDP07204 575 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 ERCC1P07992 297 aaPredicted RBP8.29□□□□□ -1.08
CIT-216ENST00000544872 CST2P09228 141 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 PRR23D2P0DMB1 279 aaPredicted RBP8.29□□□□□ -1.08
CIT-216ENST00000544872 HIST1H1CP16403 213 aaKnown RBP8.29□□□□□ -1.08
CIT-216ENST00000544872 FUT4P22083 530 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 FMO3P31513 532 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 CCKARP32238 428 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 RAD52P43351 418 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 GDI2P50395 445 aaKnown RBP8.29□□□□□ -1.08
CIT-216ENST00000544872 ZNF133P52736 654 aaPredicted RBP8.29□□□□□ -1.08
CIT-216ENST00000544872 CRISP1P54107 249 aa8.29□□□□□ -1.08
CIT-216ENST00000544872 RPS23P62266 143 aaKnown RBP8.29□□□□□ -1.08
CIT-216ENST00000544872 LSM6P62312 80 aaKnown RBP8.29□□□□□ -1.08
CIT-216ENST00000544872 BSPH1Q075Z2 132 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms