RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 MSR1P21757 451 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 LAP3P28838 519 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 CRABP1P29762 137 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 ARHGDIAP52565 204 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 HGFACQ04756 655 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 NPRL3Q12980 569 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 DEFB113Q30KQ7 82 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 SLC36A3Q495N2 470 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 SYT9Q86SS6 491 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 GLB1L2Q8IW92 636 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 DEPDC4Q8N2C3 294 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 OR2T33Q8NG76 320 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 OR52E2Q8NGJ4 325 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 SMAP2Q8WU79 429 aaPredicted RBP16.57■□□□□ 0.24
DDX55-211ENST00000544429 PYDC1Q8WXC3 89 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 PIGTQ969N2 578 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 FOXC2Q99958 501 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 DHRS9Q9BPW9 319 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 WACQ9BTA9 647 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 GABARAPL1Q9H0R8 117 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 ARFGEF3Q5TH69 2177 aa16.57■□□□□ 0.24
DDX55-211ENST00000544429 USF3Q68DE3 2245 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 OVOL3O00110 214 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 RAB36O95755 333 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 CD8AP01732 235 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 GAAP10253 952 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 OSMP13725 252 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 PAX1P15863 534 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 ZNF32P17041 273 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 NOS3P29474 1203 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 DAPP51397 102 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 NKX6-1P78426 367 aaPredicted RBP16.56■□□□□ 0.24
DDX55-211ENST00000544429 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.56■□□□□ 0.24
DDX55-211ENST00000544429 RAB39AQ14964 217 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 SGCAQ16586 387 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 SLC35F1Q5T1Q4 408 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 ZNF544Q6NX49 715 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 ZFP1Q6P2D0 407 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 UGT2A3Q6UWM9 527 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 AMIGO2Q86SJ2 522 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 JAZF1Q86VZ6 243 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 HIPK1Q86Z02 1210 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 PARP8Q8N3A8 854 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 SDR9C7Q8NEX9 313 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 NUP37Q8NFH4 326 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 CENPNQ96H22 339 aaPredicted RBP16.56■□□□□ 0.24
DDX55-211ENST00000544429 RAB3IPQ96QF0 476 aaPredicted RBP16.56■□□□□ 0.24
DDX55-211ENST00000544429 RBM4Q9BWF3 364 aaKnown RBP16.56■□□□□ 0.24
DDX55-211ENST00000544429 ZNF416Q9BWM5 594 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 NMNAT2Q9BZQ4 307 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 BEX4Q9NWD9 120 aaPredicted RBP16.56■□□□□ 0.24
DDX55-211ENST00000544429 B9D1Q9UPM9 204 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 COA3Q9Y2R0 106 aaPredicted RBP16.56■□□□□ 0.24
DDX55-211ENST00000544429 FKBP7Q9Y680 259 aa16.56■□□□□ 0.24
DDX55-211ENST00000544429 A0A1W2PPL8 197 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 G3V2T6 193 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 RENP00797 406 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 TTKP33981 857 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 LSM6P62312 80 aaKnown RBP16.55■□□□□ 0.24
DDX55-211ENST00000544429 CDK5Q00535 292 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 GABPB1Q06547 395 aaPredicted RBP16.55■□□□□ 0.24
DDX55-211ENST00000544429 C11orf71Q6IPW1 123 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 TMEM53Q6P2H8 277 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 DNM1P34Q6PK57 102 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 SVOPLQ8N434 492 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 CPEB3Q8NE35 698 aaKnown RBP16.55■□□□□ 0.24
DDX55-211ENST00000544429 OR4F15Q8NGB8 312 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 TEX47Q8TBZ9 253 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 CCL19Q99731 98 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 TRAF4Q9BUZ4 470 aaPredicted RBP16.55■□□□□ 0.24
DDX55-211ENST00000544429 ZNF556Q9HAH1 456 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 CMC2Q9NRP2 79 aa16.55■□□□□ 0.24
DDX55-211ENST00000544429 ZNF701Q9NV72 531 aaPredicted RBP16.55■□□□□ 0.24
DDX55-211ENST00000544429 MPZL1O95297 269 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 SNAP29O95721 258 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 GRK5P34947 590 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 GUCA1AP43080 201 aaPredicted RBP16.54■□□□□ 0.24
DDX55-211ENST00000544429 PSG4Q00888 419 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 DBPQ10586 325 aaPredicted RBP16.54■□□□□ 0.24
DDX55-211ENST00000544429 PABPC1L2AQ5JQF8 200 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 KDM4DQ6B0I6 523 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 ZDHHC13Q8IUH4 622 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 ATG16L2Q8NAA4 619 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 SLC37A3Q8NCC5 494 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 SLC26A10Q8NG04 563 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 OR2H1Q9GZK4 316 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 WNT5BQ9H1J7 359 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 KCNN2Q9H2S1 579 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 C1orf198Q9H425 327 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 ZNF442Q9H7R0 627 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 EMC7Q9NPA0 242 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 RPRD1BQ9NQG5 326 aaKnown RBP16.54■□□□□ 0.24
DDX55-211ENST00000544429 CA10Q9NS85 328 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 KLHL21Q9UJP4 597 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 POU2F3Q9UKI9 436 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 CELSR1Q9NYQ6 3014 aa16.54■□□□□ 0.24
DDX55-211ENST00000544429 C12orf71A8MTZ7 269 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 NR4A1P22736 598 aa16.53■□□□□ 0.24
DDX55-211ENST00000544429 APOBEC3AP31941 199 aaPredicted RBP16.53■□□□□ 0.24
DDX55-211ENST00000544429 SLC25A1P53007 311 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms