RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 SGCAQ16586 387 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 MESTQ5EB52 335 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TMEM255AQ5JRV8 349 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FAM205BPQ63HN1 556 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 RGS7BPQ6MZT1 257 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 OR1J2Q8NGS2 313 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 C1orf159Q96HA4 380 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FAM46AQ96IP4 442 aaKnown RBP11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 Q96M85 177 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GPA33Q99795 319 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 WNT5BQ9H1J7 359 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CDH20Q9HBT6 801 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ARL8BQ9NVJ2 186 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 DUSP13Q9UII6 198 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SIGLEC7Q9Y286 467 aa11.22□□□□□ -0.61
TNFRSF1A-215ENST00000543359 IQCMA0A1B0GVH7 501 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SLC22A23A1A5C7 686 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 A6NIZ1 184 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 H7C1C5 153 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 LMX1BO60663 402 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ICMTO60725 284 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 DIRAS1O95057 198 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 PTHP01270 115 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 NR2C1P13056 603 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 APEHP13798 732 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 IGFBP5P24593 272 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 STOMP27105 288 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 MSX2P35548 267 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 RAP1BP61224 184 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 LCN6P62502 163 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 RAP1AP62834 184 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 PLP2Q04941 152 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TRIP10Q15642 601 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TBC1D28Q2M2D7 210 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CHRFAM7AQ494W8 412 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 UGT2A3Q6UWM9 527 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 THSD4Q6ZMP0 1018 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CPLX4Q7Z7G2 160 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CYP4Z1Q86W10 505 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF101Q8IZC7 436 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 AKR7LQ8NHP1 331 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SYNPRQ8TBG9 265 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FNDC8Q8TC99 324 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 YIPF5Q969M3 257 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GPX7Q96SL4 187 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF416Q9BWM5 594 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 OR2H1Q9GZK4 316 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 RACGAP1Q9H0H5 632 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 OR51B6Q9H340 312 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 POLE4Q9NR33 117 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ADA2Q9NZK5 511 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TAAR3PQ9P1P4 343 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CDC42EP3Q9UKI2 254 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SAMD4AQ9UPU9 718 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TMEM5Q9Y2B1 443 aa11.21□□□□□ -0.61
TNFRSF1A-215ENST00000543359 LOC100289279A0A1B0GTE1 492 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 PRSS37A4D1T9 235 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 IMPA2O14732 288 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 AHCYL1O43865 530 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 RP2O75695 350 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 IGHV3-13P01766 116 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 ERCC1P07992 297 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 FAM157CP0CG43 387 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 CTLA4P16410 223 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 APLNRP35414 380 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 RAD52P43351 418 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 MRPS11P82912 194 aaKnown RBP11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 HSF2Q03933 536 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 ALKBH6Q3KRA9 238 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 ZER1Q7Z7L7 766 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 PGAM4Q8N0Y7 254 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 GTF3AQ92664 365 aaKnown RBP11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 HPS1Q92902 700 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 MARS2Q96GW9 593 aaKnown RBP11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 PYURFQ96I23 114 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 CDRT15Q96T59 188 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 BCL2L14Q9BZR8 327 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 LRMDAQ9H2I8 198 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 NRIP3Q9NQ35 241 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 TIMM10BQ9Y5J6 103 aa11.2□□□□□ -0.62
TNFRSF1A-215ENST00000543359 C5orf49A4QMS7 147 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 C17orf100A8MU93 164 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 TXNDC12O95881 172 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 LCKP06239 509 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 MAGEB1P43366 347 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 CHN2P52757 468 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 KLF3P57682 345 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 GNGT1P63211 74 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 ZNF774Q6NX45 483 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 SYT9Q86SS6 491 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 OR52J3Q8NH60 311 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 C11orf40Q8WZ69 217 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 RDH5Q92781 318 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 RASD2Q96D21 266 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 NSRP1Q9H0G5 558 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 KCNN2Q9H2S1 579 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 CHODLQ9H9P2 273 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 EMC7Q9NPA0 242 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 CCNB1IP1Q9NPC3 277 aa11.19□□□□□ -0.62
TNFRSF1A-215ENST00000543359 HINT3Q9NQE9 182 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms