RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 FMO3P31513 532 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 NR1H2P55055 460 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 SNRPGP62308 76 aaKnown RBP10.65□□□□□ -0.7
DDX55-210ENST00000543016 TMED1Q13445 227 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 IL18R1Q13478 541 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 TSC22D1Q15714 1073 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 SGCAQ16586 387 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 ZIK1Q3SY52 487 aaPredicted RBP10.65□□□□□ -0.7
DDX55-210ENST00000543016 HIKESHIQ53FT3 197 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 BEX5Q5H9J7 111 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 MEDAGQ5VYS4 303 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 NXNL2Q5VZ03 156 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 TMEM53Q6P2H8 277 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 PLBD1Q6P4A8 553 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 CXXC5Q7LFL8 322 aaKnown RBP10.65□□□□□ -0.7
DDX55-210ENST00000543016 SLC16A14Q7RTX9 510 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 CPOQ8IVL8 374 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 GID4Q8IVV7 300 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 DHRSXQ8N5I4 330 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 IL17RDQ8NFM7 739 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 OR10H5Q8NGA6 315 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 LINC01560Q8TB33 94 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 TMEM163Q8TC26 289 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 NABP1Q96AH0 204 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 MBOAT4Q96T53 435 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 C1orf198Q9H425 327 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 RERGLQ9H628 205 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 CRIM1Q9NZV1 1036 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 CRNNQ9UBG3 495 aaPredicted RBP10.65□□□□□ -0.7
DDX55-210ENST00000543016 TIMM10BQ9Y5J6 103 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 GMPPBQ9Y5P6 360 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 HSPE1-MOB4S4R3N1 261 aa10.65□□□□□ -0.7
DDX55-210ENST00000543016 GCN1Q92616 2671 aaKnown RBP10.65□□□□□ -0.7
DDX55-210ENST00000543016 DCTN6O00399 190 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 DLGAP1O14490 977 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 PRKYO43930 277 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 THBDP07204 575 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 GAAP10253 952 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 ZNF823P16415 610 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 PTAFRP25105 342 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 CAPZA2P47755 286 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 HSPA13P48723 471 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 SCRN3Q0VDG4 424 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 AQP6Q13520 282 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 ETFDHQ16134 617 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 GSG1Q2KHT4 349 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 TEX30Q5JUR7 227 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 LCN1P1Q5VSP4 162 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 TMEM108Q6UXF1 575 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 SKA3Q8IX90 412 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 ALDH16A1Q8IZ83 802 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 TCEANCQ8N8B7 351 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 SETD9Q8NE22 299 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 SLC26A10Q8NG04 563 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 OR52N5Q8NH56 324 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 FAM81AQ8TBF8 368 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 RFKQ969G6 155 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 RADILQ96JH8 1075 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 Q96MT0 163 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 TSSK2Q96PF2 358 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 ESRP2Q9H6T0 727 aaKnown RBP10.64□□□□□ -0.71
DDX55-210ENST00000543016 CCNB1IP1Q9NPC3 277 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 HINT3Q9NQE9 182 aaKnown RBP10.64□□□□□ -0.71
DDX55-210ENST00000543016 B3GNT2Q9NY97 397 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 PKDREJQ9NTG1 2253 aa10.64□□□□□ -0.71
DDX55-210ENST00000543016 SLC22A31A6NKX4 558 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 FAM183AA6NL82 134 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 RAB36O95755 333 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 IGKV3-15P01624 115 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 HLA-DQA2P01906 255 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 CD79AP11912 226 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 CDAP32320 146 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 RAB1AP62820 205 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 TEKQ02763 1124 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 PLP2Q04941 152 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 OCLNQ16625 522 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 LINC01590Q5TEZ4 76 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 AADACL4Q5VUY2 407 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 MEPCEQ7L2J0 689 aaKnown RBP10.63□□□□□ -0.71
DDX55-210ENST00000543016 WFDC8Q8IUA0 241 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 OR9Q1Q8NGQ5 310 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 NRG4Q8WWG1 115 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 IPCEF1Q8WWN9 437 aaPredicted RBP10.63□□□□□ -0.71
DDX55-210ENST00000543016 C11orf40Q8WZ69 217 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 OTULINQ96BN8 352 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 C14orf79Q96F83 325 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 SH3GL3Q99963 347 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 ADI1Q9BV57 179 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 ZNF416Q9BWM5 594 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 CDADC1Q9BWV3 514 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 OR51V1Q9H2C8 321 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 RNF121Q9H920 327 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 MARCH7Q9H992 704 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 HAO2Q9NYQ3 351 aa10.63□□□□□ -0.71
DDX55-210ENST00000543016 WARS2Q9UGM6 360 aaKnown RBP10.63□□□□□ -0.71
DDX55-210ENST00000543016 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.63□□□□□ -0.71
DDX55-210ENST00000543016 PTPN13Q12923 2485 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 IQCMA0A1B0GVH7 501 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 SEC14L2O76054 403 aa10.62□□□□□ -0.71
DDX55-210ENST00000543016 IGLV1-44P01699 117 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms